RNA–Protein interactions for RNA: ENST00000340344.4

NDUFV3-201, Transcript of NADH:ubiquinone oxidoreductase subunit V3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFV3, Length 4,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3-201ENST00000340344 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
NDUFV3-201ENST00000340344 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
NDUFV3-201ENST00000340344 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
NDUFV3-201ENST00000340344 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.14
NDUFV3-201ENST00000340344 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
NDUFV3-201ENST00000340344 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
NDUFV3-201ENST00000340344 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
NDUFV3-201ENST00000340344 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
NDUFV3-201ENST00000340344 NACADO15069 1562 aa15.35■□□□□ 0.05
NDUFV3-201ENST00000340344 ABCC9O60706 1549 aa15.22■□□□□ 0.03
NDUFV3-201ENST00000340344 SCRIBQ14160 1630 aa15.21■□□□□ 0.03
NDUFV3-201ENST00000340344 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
NDUFV3-201ENST00000340344 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
NDUFV3-201ENST00000340344 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
NDUFV3-201ENST00000340344 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.03
NDUFV3-201ENST00000340344 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
NDUFV3-201ENST00000340344 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
NDUFV3-201ENST00000340344 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
NDUFV3-201ENST00000340344 WIZO95785 1651 aa14.62□□□□□ -0.07
NDUFV3-201ENST00000340344 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
NDUFV3-201ENST00000340344 SMARCA4P51532 1647 aa14.61□□□□□ -0.07
NDUFV3-201ENST00000340344 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
NDUFV3-201ENST00000340344 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.09
NDUFV3-201ENST00000340344 PCGF6Q9BYE7 350 aa14.5□□□□□ -0.09
NDUFV3-201ENST00000340344 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
NDUFV3-201ENST00000340344 HRCP23327 699 aa14.47□□□□□ -0.09
NDUFV3-201ENST00000340344 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
NDUFV3-201ENST00000340344 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
NDUFV3-201ENST00000340344 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
NDUFV3-201ENST00000340344 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
NDUFV3-201ENST00000340344 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
NDUFV3-201ENST00000340344 EEA1Q15075 1411 aa14.4□□□□□ -0.1
NDUFV3-201ENST00000340344 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
NDUFV3-201ENST00000340344 ZEB1P37275 1124 aaPredicted RBP14.36□□□□□ -0.11
NDUFV3-201ENST00000340344 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
NDUFV3-201ENST00000340344 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
NDUFV3-201ENST00000340344 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
NDUFV3-201ENST00000340344 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
NDUFV3-201ENST00000340344 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
NDUFV3-201ENST00000340344 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
NDUFV3-201ENST00000340344 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
NDUFV3-201ENST00000340344 TNIKQ9UKE5 1360 aa14.16□□□□□ -0.14
NDUFV3-201ENST00000340344 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
NDUFV3-201ENST00000340344 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
NDUFV3-201ENST00000340344 UBTFP17480 764 aaKnown RBP14.14□□□□□ -0.15
NDUFV3-201ENST00000340344 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
NDUFV3-201ENST00000340344 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
NDUFV3-201ENST00000340344 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
NDUFV3-201ENST00000340344 SOGA1O94964 1423 aa14.06□□□□□ -0.16
NDUFV3-201ENST00000340344 APLP2Q06481 763 aa14.04□□□□□ -0.16
NDUFV3-201ENST00000340344 KIF21BO75037 1637 aa14.01□□□□□ -0.17
NDUFV3-201ENST00000340344 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
NDUFV3-201ENST00000340344 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
NDUFV3-201ENST00000340344 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
NDUFV3-201ENST00000340344 CLIP1P30622 1438 aa13.92□□□□□ -0.18
NDUFV3-201ENST00000340344 CFTRP13569 1480 aa13.91□□□□□ -0.18
NDUFV3-201ENST00000340344 KIF27Q86VH2 1401 aa13.9□□□□□ -0.18
NDUFV3-201ENST00000340344 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
NDUFV3-201ENST00000340344 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
NDUFV3-201ENST00000340344 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
NDUFV3-201ENST00000340344 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
NDUFV3-201ENST00000340344 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.19
NDUFV3-201ENST00000340344 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.2
NDUFV3-201ENST00000340344 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
NDUFV3-201ENST00000340344 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
NDUFV3-201ENST00000340344 CUX1P39880 1505 aa13.77□□□□□ -0.2
NDUFV3-201ENST00000340344 PRXQ9BXM0 1461 aa13.76□□□□□ -0.21
NDUFV3-201ENST00000340344 TTBK1Q5TCY1 1321 aaPredicted RBP13.74□□□□□ -0.21
NDUFV3-201ENST00000340344 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
NDUFV3-201ENST00000340344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
NDUFV3-201ENST00000340344 CUX2O14529 1486 aa13.69□□□□□ -0.22
NDUFV3-201ENST00000340344 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
NDUFV3-201ENST00000340344 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
NDUFV3-201ENST00000340344 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
NDUFV3-201ENST00000340344 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
NDUFV3-201ENST00000340344 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
NDUFV3-201ENST00000340344 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
NDUFV3-201ENST00000340344 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
NDUFV3-201ENST00000340344 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.23
NDUFV3-201ENST00000340344 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
NDUFV3-201ENST00000340344 IGF1RP08069 1367 aa13.58□□□□□ -0.24
NDUFV3-201ENST00000340344 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
NDUFV3-201ENST00000340344 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
NDUFV3-201ENST00000340344 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
NDUFV3-201ENST00000340344 MAP3K1Q13233 1512 aa13.52□□□□□ -0.24
NDUFV3-201ENST00000340344 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
NDUFV3-201ENST00000340344 CUL7Q14999 1698 aa13.52□□□□□ -0.25
NDUFV3-201ENST00000340344 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
NDUFV3-201ENST00000340344 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
NDUFV3-201ENST00000340344 POLA1P09884 1462 aaPredicted RBP13.47□□□□□ -0.25
NDUFV3-201ENST00000340344 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
NDUFV3-201ENST00000340344 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
NDUFV3-201ENST00000340344 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
NDUFV3-201ENST00000340344 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.26
NDUFV3-201ENST00000340344 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
NDUFV3-201ENST00000340344 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
NDUFV3-201ENST00000340344 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
NDUFV3-201ENST00000340344 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
NDUFV3-201ENST00000340344 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
NDUFV3-201ENST00000340344 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms