RNA–Protein interactions for RNA: ENST00000580861.1

LINC00511-210, long intergenic non-protein coding RNA 511, humanhuman

TSL 4

Gene LINC00511, Length 467 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-210ENST00000580861 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
LINC00511-210ENST00000580861 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
LINC00511-210ENST00000580861 ABCC9O60706 1549 aa18.37■□□□□ 0.53
LINC00511-210ENST00000580861 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
LINC00511-210ENST00000580861 NACADO15069 1562 aa17.79■□□□□ 0.44
LINC00511-210ENST00000580861 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
LINC00511-210ENST00000580861 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.43
LINC00511-210ENST00000580861 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
LINC00511-210ENST00000580861 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
LINC00511-210ENST00000580861 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
LINC00511-210ENST00000580861 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
LINC00511-210ENST00000580861 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
LINC00511-210ENST00000580861 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00511-210ENST00000580861 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
LINC00511-210ENST00000580861 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
LINC00511-210ENST00000580861 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
LINC00511-210ENST00000580861 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
LINC00511-210ENST00000580861 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
LINC00511-210ENST00000580861 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
LINC00511-210ENST00000580861 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
LINC00511-210ENST00000580861 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
LINC00511-210ENST00000580861 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
LINC00511-210ENST00000580861 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
LINC00511-210ENST00000580861 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
LINC00511-210ENST00000580861 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
LINC00511-210ENST00000580861 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
LINC00511-210ENST00000580861 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
LINC00511-210ENST00000580861 WIZO95785 1651 aa16.31■□□□□ 0.2
LINC00511-210ENST00000580861 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
LINC00511-210ENST00000580861 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
LINC00511-210ENST00000580861 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
LINC00511-210ENST00000580861 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
LINC00511-210ENST00000580861 NESP48681 1621 aa15.97■□□□□ 0.15
LINC00511-210ENST00000580861 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
LINC00511-210ENST00000580861 LAMC3Q9Y6N6 1575 aa15.92■□□□□ 0.14
LINC00511-210ENST00000580861 CFTRP13569 1480 aa15.91■□□□□ 0.14
LINC00511-210ENST00000580861 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
LINC00511-210ENST00000580861 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
LINC00511-210ENST00000580861 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
LINC00511-210ENST00000580861 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
LINC00511-210ENST00000580861 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
LINC00511-210ENST00000580861 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
LINC00511-210ENST00000580861 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
LINC00511-210ENST00000580861 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
LINC00511-210ENST00000580861 WDR62O43379 1518 aa15.62■□□□□ 0.09
LINC00511-210ENST00000580861 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
LINC00511-210ENST00000580861 CUX2O14529 1486 aa15.59■□□□□ 0.09
LINC00511-210ENST00000580861 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
LINC00511-210ENST00000580861 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
LINC00511-210ENST00000580861 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
LINC00511-210ENST00000580861 CUX1P39880 1505 aa15.49■□□□□ 0.07
LINC00511-210ENST00000580861 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
LINC00511-210ENST00000580861 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
LINC00511-210ENST00000580861 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
LINC00511-210ENST00000580861 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
LINC00511-210ENST00000580861 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
LINC00511-210ENST00000580861 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
LINC00511-210ENST00000580861 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
LINC00511-210ENST00000580861 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
LINC00511-210ENST00000580861 RAD54L2Q9Y4B4 1467 aa15.34■□□□□ 0.05
LINC00511-210ENST00000580861 SOGA1O94964 1423 aa15.34■□□□□ 0.05
LINC00511-210ENST00000580861 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.04
LINC00511-210ENST00000580861 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
LINC00511-210ENST00000580861 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
LINC00511-210ENST00000580861 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00511-210ENST00000580861 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
LINC00511-210ENST00000580861 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
LINC00511-210ENST00000580861 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
LINC00511-210ENST00000580861 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
LINC00511-210ENST00000580861 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
LINC00511-210ENST00000580861 CHIC1Q5VXU3 224 aa15.14■□□□□ 0.01
LINC00511-210ENST00000580861 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
LINC00511-210ENST00000580861 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
LINC00511-210ENST00000580861 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
LINC00511-210ENST00000580861 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
LINC00511-210ENST00000580861 IGF1RP08069 1367 aa15.07■□□□□ 0
LINC00511-210ENST00000580861 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
LINC00511-210ENST00000580861 PBRM1Q86U86 1689 aa15.06■□□□□ 0
LINC00511-210ENST00000580861 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
LINC00511-210ENST00000580861 SYNJ2O15056 1496 aa15.02■□□□□ -0
LINC00511-210ENST00000580861 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
LINC00511-210ENST00000580861 ADAMTS12P58397 1594 aa15□□□□□ -0.01
LINC00511-210ENST00000580861 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
LINC00511-210ENST00000580861 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
LINC00511-210ENST00000580861 CHD1O14646 1710 aa14.96□□□□□ -0.01
LINC00511-210ENST00000580861 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
LINC00511-210ENST00000580861 FBLN2P98095 1184 aa14.95□□□□□ -0.02
LINC00511-210ENST00000580861 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
LINC00511-210ENST00000580861 CARMIL1Q5VZK9 1371 aa14.94□□□□□ -0.02
LINC00511-210ENST00000580861 NUP160Q12769 1436 aa14.92□□□□□ -0.02
LINC00511-210ENST00000580861 CUL7Q14999 1698 aa14.91□□□□□ -0.02
LINC00511-210ENST00000580861 EEA1Q15075 1411 aa14.9□□□□□ -0.02
LINC00511-210ENST00000580861 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
LINC00511-210ENST00000580861 CLASP1Q7Z460 1538 aa14.88□□□□□ -0.03
LINC00511-210ENST00000580861 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
LINC00511-210ENST00000580861 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
LINC00511-210ENST00000580861 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
LINC00511-210ENST00000580861 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
LINC00511-210ENST00000580861 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
LINC00511-210ENST00000580861 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms