RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-238ENST00000622457 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
LTBP4-238ENST00000622457 ABCC9O60706 1549 aa26.72■■□□□ 1.87
LTBP4-238ENST00000622457 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
LTBP4-238ENST00000622457 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
LTBP4-238ENST00000622457 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
LTBP4-238ENST00000622457 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
LTBP4-238ENST00000622457 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
LTBP4-238ENST00000622457 NACADO15069 1562 aa24.47■■□□□ 1.51
LTBP4-238ENST00000622457 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
LTBP4-238ENST00000622457 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
LTBP4-238ENST00000622457 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
LTBP4-238ENST00000622457 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
LTBP4-238ENST00000622457 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
LTBP4-238ENST00000622457 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
LTBP4-238ENST00000622457 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
LTBP4-238ENST00000622457 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
LTBP4-238ENST00000622457 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
LTBP4-238ENST00000622457 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
LTBP4-238ENST00000622457 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
LTBP4-238ENST00000622457 CUX2O14529 1486 aa23.21■■□□□ 1.31
LTBP4-238ENST00000622457 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
LTBP4-238ENST00000622457 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
LTBP4-238ENST00000622457 NESP48681 1621 aa22.79■■□□□ 1.24
LTBP4-238ENST00000622457 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
LTBP4-238ENST00000622457 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
LTBP4-238ENST00000622457 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
LTBP4-238ENST00000622457 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
LTBP4-238ENST00000622457 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
LTBP4-238ENST00000622457 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
LTBP4-238ENST00000622457 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
LTBP4-238ENST00000622457 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
LTBP4-238ENST00000622457 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
LTBP4-238ENST00000622457 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
LTBP4-238ENST00000622457 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
LTBP4-238ENST00000622457 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
LTBP4-238ENST00000622457 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
LTBP4-238ENST00000622457 WDR62O43379 1518 aa22.06■■□□□ 1.12
LTBP4-238ENST00000622457 WIZO95785 1651 aa22.06■■□□□ 1.12
LTBP4-238ENST00000622457 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
LTBP4-238ENST00000622457 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
LTBP4-238ENST00000622457 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
LTBP4-238ENST00000622457 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
LTBP4-238ENST00000622457 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
LTBP4-238ENST00000622457 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
LTBP4-238ENST00000622457 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
LTBP4-238ENST00000622457 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
LTBP4-238ENST00000622457 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
LTBP4-238ENST00000622457 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
LTBP4-238ENST00000622457 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
LTBP4-238ENST00000622457 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
LTBP4-238ENST00000622457 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
LTBP4-238ENST00000622457 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
LTBP4-238ENST00000622457 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
LTBP4-238ENST00000622457 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
LTBP4-238ENST00000622457 CFTRP13569 1480 aa21.57■■□□□ 1.04
LTBP4-238ENST00000622457 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
LTBP4-238ENST00000622457 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
LTBP4-238ENST00000622457 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
LTBP4-238ENST00000622457 CHD1O14646 1710 aa21.48■■□□□ 1.03
LTBP4-238ENST00000622457 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
LTBP4-238ENST00000622457 IFT140Q96RY7 1462 aa21.32■■□□□ 1
LTBP4-238ENST00000622457 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.992e-6■■□□□ 12.9
LTBP4-238ENST00000622457 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
LTBP4-238ENST00000622457 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
LTBP4-238ENST00000622457 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
LTBP4-238ENST00000622457 FBLN2P98095 1184 aa21.16■□□□□ 0.98
LTBP4-238ENST00000622457 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
LTBP4-238ENST00000622457 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
LTBP4-238ENST00000622457 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
LTBP4-238ENST00000622457 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
LTBP4-238ENST00000622457 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
LTBP4-238ENST00000622457 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
LTBP4-238ENST00000622457 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
LTBP4-238ENST00000622457 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
LTBP4-238ENST00000622457 CUX1P39880 1505 aa20.92■□□□□ 0.94
LTBP4-238ENST00000622457 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
LTBP4-238ENST00000622457 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
LTBP4-238ENST00000622457 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
LTBP4-238ENST00000622457 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
LTBP4-238ENST00000622457 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
LTBP4-238ENST00000622457 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
LTBP4-238ENST00000622457 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
LTBP4-238ENST00000622457 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
LTBP4-238ENST00000622457 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
LTBP4-238ENST00000622457 SOGA1O94964 1423 aa20.78■□□□□ 0.92
LTBP4-238ENST00000622457 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
LTBP4-238ENST00000622457 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
LTBP4-238ENST00000622457 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
LTBP4-238ENST00000622457 PBRM1Q86U86 1689 aa20.7■□□□□ 0.91
LTBP4-238ENST00000622457 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
LTBP4-238ENST00000622457 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
LTBP4-238ENST00000622457 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
LTBP4-238ENST00000622457 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
LTBP4-238ENST00000622457 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
LTBP4-238ENST00000622457 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
LTBP4-238ENST00000622457 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
LTBP4-238ENST00000622457 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
LTBP4-238ENST00000622457 GRIN2AQ12879 1464 aa20.45■□□□□ 0.86
LTBP4-238ENST00000622457 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
LTBP4-238ENST00000622457 KDM6BO15054 1643 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms