RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
NUP153-203ENST00000613258 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
NUP153-203ENST00000613258 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
NUP153-203ENST00000613258 SHROOM4Q9ULL8 1493 aa23.79■■□□□ 1.4
NUP153-203ENST00000613258 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
NUP153-203ENST00000613258 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
NUP153-203ENST00000613258 APLP2Q06481 763 aa22.3■■□□□ 1.16
NUP153-203ENST00000613258 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
NUP153-203ENST00000613258 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
NUP153-203ENST00000613258 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
NUP153-203ENST00000613258 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
NUP153-203ENST00000613258 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
NUP153-203ENST00000613258 ABCC9O60706 1549 aa21.74■■□□□ 1.07
NUP153-203ENST00000613258 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
NUP153-203ENST00000613258 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
NUP153-203ENST00000613258 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
NUP153-203ENST00000613258 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
NUP153-203ENST00000613258 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
NUP153-203ENST00000613258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
NUP153-203ENST00000613258 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
NUP153-203ENST00000613258 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
NUP153-203ENST00000613258 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
NUP153-203ENST00000613258 ITGAEP38570 1179 aa21.08■□□□□ 0.96
NUP153-203ENST00000613258 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
NUP153-203ENST00000613258 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
NUP153-203ENST00000613258 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
NUP153-203ENST00000613258 SCRIBQ14160 1630 aa20.83■□□□□ 0.92
NUP153-203ENST00000613258 YTHDC1Q96MU7 727 aaKnown RBP20.77■□□□□ 0.92
NUP153-203ENST00000613258 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
NUP153-203ENST00000613258 FBLN2P98095 1184 aa20.71■□□□□ 0.91
NUP153-203ENST00000613258 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
NUP153-203ENST00000613258 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
NUP153-203ENST00000613258 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
NUP153-203ENST00000613258 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
NUP153-203ENST00000613258 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
NUP153-203ENST00000613258 NEFLP07196 543 aa20.45■□□□□ 0.86
NUP153-203ENST00000613258 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
NUP153-203ENST00000613258 ERICH6Q7L0X2 663 aa20.42■□□□□ 0.86
NUP153-203ENST00000613258 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
NUP153-203ENST00000613258 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
NUP153-203ENST00000613258 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
NUP153-203ENST00000613258 HRCP23327 699 aa20.36■□□□□ 0.85
NUP153-203ENST00000613258 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
NUP153-203ENST00000613258 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
NUP153-203ENST00000613258 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
NUP153-203ENST00000613258 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
NUP153-203ENST00000613258 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
NUP153-203ENST00000613258 NACADO15069 1562 aa20■□□□□ 0.79
NUP153-203ENST00000613258 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
NUP153-203ENST00000613258 BCANQ96GW7 911 aa19.94■□□□□ 0.78
NUP153-203ENST00000613258 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
NUP153-203ENST00000613258 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
NUP153-203ENST00000613258 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
NUP153-203ENST00000613258 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.77
NUP153-203ENST00000613258 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.77
NUP153-203ENST00000613258 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
NUP153-203ENST00000613258 MYT1Q01538 1121 aa19.79■□□□□ 0.76
NUP153-203ENST00000613258 DAXXQ9UER7 740 aaPredicted RBP19.76■□□□□ 0.75
NUP153-203ENST00000613258 ESF1Q9H501 851 aaKnown RBP19.75■□□□□ 0.75
NUP153-203ENST00000613258 ANP32CO43423 234 aa19.71■□□□□ 0.75
NUP153-203ENST00000613258 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
NUP153-203ENST00000613258 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
NUP153-203ENST00000613258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.743e-7■■■□□ 15.8
NUP153-203ENST00000613258 STAG3Q9UJ98 1225 aa19.65■□□□□ 0.74
NUP153-203ENST00000613258 SLC24A1O60721 1099 aa19.64■□□□□ 0.74
NUP153-203ENST00000613258 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
NUP153-203ENST00000613258 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
NUP153-203ENST00000613258 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
NUP153-203ENST00000613258 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
NUP153-203ENST00000613258 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
NUP153-203ENST00000613258 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
NUP153-203ENST00000613258 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.73
NUP153-203ENST00000613258 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
NUP153-203ENST00000613258 CLIP1P30622 1438 aa19.57■□□□□ 0.72
NUP153-203ENST00000613258 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
NUP153-203ENST00000613258 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
NUP153-203ENST00000613258 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
NUP153-203ENST00000613258 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
NUP153-203ENST00000613258 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
NUP153-203ENST00000613258 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
NUP153-203ENST00000613258 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
NUP153-203ENST00000613258 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
NUP153-203ENST00000613258 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
NUP153-203ENST00000613258 NEFMP07197 916 aa19.44■□□□□ 0.7
NUP153-203ENST00000613258 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
NUP153-203ENST00000613258 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
NUP153-203ENST00000613258 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
NUP153-203ENST00000613258 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
NUP153-203ENST00000613258 EEA1Q15075 1411 aa19.38■□□□□ 0.69
NUP153-203ENST00000613258 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
NUP153-203ENST00000613258 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
NUP153-203ENST00000613258 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
NUP153-203ENST00000613258 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
NUP153-203ENST00000613258 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
NUP153-203ENST00000613258 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
NUP153-203ENST00000613258 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
NUP153-203ENST00000613258 CUX2O14529 1486 aa19.26■□□□□ 0.67
NUP153-203ENST00000613258 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
NUP153-203ENST00000613258 ARID4BQ4LE39 1312 aaPredicted RBP19.23■□□□□ 0.67
NUP153-203ENST00000613258 CFDP1Q9UEE9 299 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms