RNA–Protein interactions for RNA: ENST00000503705.5

CENPE-203, Transcript of centromere protein E, humanhuman

TSL 2

Gene CENPE, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-203ENST00000503705 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.8
CENPE-203ENST00000503705 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
CENPE-203ENST00000503705 ABCC9O60706 1549 aa17.36■□□□□ 0.37
CENPE-203ENST00000503705 MYO15BQ96JP2 1530 aa17.1■□□□□ 0.33
CENPE-203ENST00000503705 NACADO15069 1562 aa17.04■□□□□ 0.32
CENPE-203ENST00000503705 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
CENPE-203ENST00000503705 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
CENPE-203ENST00000503705 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.27
CENPE-203ENST00000503705 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.27
CENPE-203ENST00000503705 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
CENPE-203ENST00000503705 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
CENPE-203ENST00000503705 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
CENPE-203ENST00000503705 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
CENPE-203ENST00000503705 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
CENPE-203ENST00000503705 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
CENPE-203ENST00000503705 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.15
CENPE-203ENST00000503705 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.14
CENPE-203ENST00000503705 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
CENPE-203ENST00000503705 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
CENPE-203ENST00000503705 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
CENPE-203ENST00000503705 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
CENPE-203ENST00000503705 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
CENPE-203ENST00000503705 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
CENPE-203ENST00000503705 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
CENPE-203ENST00000503705 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
CENPE-203ENST00000503705 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
CENPE-203ENST00000503705 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
CENPE-203ENST00000503705 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
CENPE-203ENST00000503705 CUX2O14529 1486 aa15.27■□□□□ 0.03
CENPE-203ENST00000503705 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
CENPE-203ENST00000503705 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
CENPE-203ENST00000503705 WIZO95785 1651 aa15.2■□□□□ 0.02
CENPE-203ENST00000503705 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
CENPE-203ENST00000503705 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
CENPE-203ENST00000503705 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
CENPE-203ENST00000503705 WDR62O43379 1518 aa15.03■□□□□ -0
CENPE-203ENST00000503705 NESP48681 1621 aa15.02■□□□□ -0
CENPE-203ENST00000503705 CFTRP13569 1480 aa15□□□□□ -0.01
CENPE-203ENST00000503705 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
CENPE-203ENST00000503705 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
CENPE-203ENST00000503705 ERCC6Q03468 1493 aa15□□□□□ -0.01
CENPE-203ENST00000503705 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
CENPE-203ENST00000503705 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
CENPE-203ENST00000503705 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.04
CENPE-203ENST00000503705 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
CENPE-203ENST00000503705 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
CENPE-203ENST00000503705 ABCC8Q09428 1581 aa14.75□□□□□ -0.05
CENPE-203ENST00000503705 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
CENPE-203ENST00000503705 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
CENPE-203ENST00000503705 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
CENPE-203ENST00000503705 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
CENPE-203ENST00000503705 TOPBP1Q92547 1522 aa14.63□□□□□ -0.07
CENPE-203ENST00000503705 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
CENPE-203ENST00000503705 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
CENPE-203ENST00000503705 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
CENPE-203ENST00000503705 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
CENPE-203ENST00000503705 CUX1P39880 1505 aa14.46□□□□□ -0.09
CENPE-203ENST00000503705 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
CENPE-203ENST00000503705 TOP2BQ02880 1626 aa14.42□□□□□ -0.1
CENPE-203ENST00000503705 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
CENPE-203ENST00000503705 CHD1O14646 1710 aa14.41□□□□□ -0.1
CENPE-203ENST00000503705 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
CENPE-203ENST00000503705 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
CENPE-203ENST00000503705 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
CENPE-203ENST00000503705 MAGI1Q96QZ7 1491 aaPredicted RBP14.35□□□□□ -0.11
CENPE-203ENST00000503705 CLASP1Q7Z460 1538 aa14.33□□□□□ -0.12
CENPE-203ENST00000503705 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
CENPE-203ENST00000503705 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
CENPE-203ENST00000503705 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
CENPE-203ENST00000503705 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
CENPE-203ENST00000503705 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
CENPE-203ENST00000503705 SOGA1O94964 1423 aa14.28□□□□□ -0.12
CENPE-203ENST00000503705 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
CENPE-203ENST00000503705 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
CENPE-203ENST00000503705 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
CENPE-203ENST00000503705 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
CENPE-203ENST00000503705 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
CENPE-203ENST00000503705 SHROOM2Q13796 1616 aa14.21□□□□□ -0.13
CENPE-203ENST00000503705 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.145e-7■■■□□ 17.5
CENPE-203ENST00000503705 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.14
CENPE-203ENST00000503705 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
CENPE-203ENST00000503705 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
CENPE-203ENST00000503705 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
CENPE-203ENST00000503705 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
CENPE-203ENST00000503705 CUL7Q14999 1698 aa14.14□□□□□ -0.15
CENPE-203ENST00000503705 NUP160Q12769 1436 aa14.13□□□□□ -0.15
CENPE-203ENST00000503705 GRIN2AQ12879 1464 aa14.09□□□□□ -0.15
CENPE-203ENST00000503705 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
CENPE-203ENST00000503705 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
CENPE-203ENST00000503705 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
CENPE-203ENST00000503705 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
CENPE-203ENST00000503705 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
CENPE-203ENST00000503705 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
CENPE-203ENST00000503705 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
CENPE-203ENST00000503705 KIAA0586Q9BVV6 1533 aa13.87□□□□□ -0.19
CENPE-203ENST00000503705 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
CENPE-203ENST00000503705 IGF1RP08069 1367 aa13.86□□□□□ -0.19
CENPE-203ENST00000503705 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
CENPE-203ENST00000503705 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
CENPE-203ENST00000503705 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms