RNA–Protein interactions for RNA: ENST00000480143.5

NME1-207, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2 BASIC

Gene NME1, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-207ENST00000480143 NISCHQ9Y2I1 1504 aa45.66■■■■■ 4.9
NME1-207ENST00000480143 CCDC180Q9P1Z9 1646 aa40.21■■■■■ 4.03
NME1-207ENST00000480143 ABCC9O60706 1549 aa38.41■■■■□ 3.74
NME1-207ENST00000480143 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
NME1-207ENST00000480143 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
NME1-207ENST00000480143 MYO15BQ96JP2 1530 aa37.81■■■■□ 3.64
NME1-207ENST00000480143 DCAF8L2P0C7V8 631 aa37.69■■■■□ 3.62
NME1-207ENST00000480143 NACADO15069 1562 aa37.66■■■■□ 3.62
NME1-207ENST00000480143 RB1CC1Q8TDY2 1594 aa37.44■■■■□ 3.58
NME1-207ENST00000480143 SCRIBQ14160 1630 aa36.61■■■■□ 3.45
NME1-207ENST00000480143 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
NME1-207ENST00000480143 SHROOM4Q9ULL8 1493 aa36.39■■■■□ 3.42
NME1-207ENST00000480143 BICRAQ9NZM4 1560 aa36.21■■■■□ 3.39
NME1-207ENST00000480143 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
NME1-207ENST00000480143 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
NME1-207ENST00000480143 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
NME1-207ENST00000480143 EIF4G1Q04637 1599 aaKnown RBP35.2■■■■□ 3.23
NME1-207ENST00000480143 SMARCA4P51532 1647 aa35.19■■■■□ 3.22
NME1-207ENST00000480143 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
NME1-207ENST00000480143 RSF1Q96T23 1441 aaPredicted RBP35.1■■■■□ 3.21
NME1-207ENST00000480143 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
NME1-207ENST00000480143 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
NME1-207ENST00000480143 ATAD2BQ9ULI0 1458 aa34.84■■■■□ 3.17
NME1-207ENST00000480143 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
NME1-207ENST00000480143 NCAPD3P42695 1498 aa34.76■■■■□ 3.15
NME1-207ENST00000480143 SUPT5HO00267 1087 aaKnown RBP34.75■■■■□ 3.15
NME1-207ENST00000480143 WIZO95785 1651 aa34.74■■■■□ 3.15
NME1-207ENST00000480143 HMGXB3Q12766 1538 aa34.62■■■■□ 3.13
NME1-207ENST00000480143 BAZ1BQ9UIG0 1483 aaKnown RBP34.58■■■■□ 3.13
NME1-207ENST00000480143 TOP2AP11388 1531 aaKnown RBP34.52■■■■□ 3.12
NME1-207ENST00000480143 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
NME1-207ENST00000480143 CCDC88BA6NC98 1476 aa34.1■■■■□ 3.05
NME1-207ENST00000480143 CADPSQ9ULU8 1353 aa33.76■■■■□ 3
NME1-207ENST00000480143 CFTRP13569 1480 aa33.74■■■□□ 2.99
NME1-207ENST00000480143 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
NME1-207ENST00000480143 NESP48681 1621 aa33.47■■■□□ 2.95
NME1-207ENST00000480143 PRDM2Q13029 1718 aa33.44■■■□□ 2.94
NME1-207ENST00000480143 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
NME1-207ENST00000480143 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
NME1-207ENST00000480143 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
NME1-207ENST00000480143 ERCC6Q03468 1493 aa33.08■■■□□ 2.89
NME1-207ENST00000480143 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
NME1-207ENST00000480143 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.89
NME1-207ENST00000480143 ABCC8Q09428 1581 aa33.06■■■□□ 2.88
NME1-207ENST00000480143 CHIC1Q5VXU3 224 aa33.03■■■□□ 2.88
NME1-207ENST00000480143 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
NME1-207ENST00000480143 DNMBPQ6XZF7 1577 aa32.92■■■□□ 2.86
NME1-207ENST00000480143 CUX1P39880 1505 aa32.9■■■□□ 2.86
NME1-207ENST00000480143 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
NME1-207ENST00000480143 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
NME1-207ENST00000480143 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
NME1-207ENST00000480143 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
NME1-207ENST00000480143 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
NME1-207ENST00000480143 SYNJ1O43426 1573 aa32.84■■■□□ 2.85
NME1-207ENST00000480143 WDR62O43379 1518 aa32.83■■■□□ 2.85
NME1-207ENST00000480143 THOC2Q8NI27 1593 aaKnown RBP32.82■■■□□ 2.84
NME1-207ENST00000480143 FGD5Q6ZNL6 1462 aa32.67■■■□□ 2.82
NME1-207ENST00000480143 POLA1P09884 1462 aaPredicted RBP32.64■■■□□ 2.82
NME1-207ENST00000480143 SOGA1O94964 1423 aa32.57■■■□□ 2.8
NME1-207ENST00000480143 CUX2O14529 1486 aa32.53■■■□□ 2.8
NME1-207ENST00000480143 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
NME1-207ENST00000480143 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
NME1-207ENST00000480143 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
NME1-207ENST00000480143 TARBP1Q13395 1621 aaKnown RBP32.43■■■□□ 2.78
NME1-207ENST00000480143 EEA1Q15075 1411 aa32.39■■■□□ 2.78
NME1-207ENST00000480143 WDR97A6NE52 1622 aa32.36■■■□□ 2.77
NME1-207ENST00000480143 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
NME1-207ENST00000480143 TDRD9Q8NDG6 1382 aaKnown RBP32.21■■■□□ 2.75
NME1-207ENST00000480143 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
NME1-207ENST00000480143 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
NME1-207ENST00000480143 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
NME1-207ENST00000480143 ZNF608Q9ULD9 1512 aaPredicted RBP32.16■■■□□ 2.74
NME1-207ENST00000480143 CSRNP3Q8WYN3 585 aa32.15■■■□□ 2.74
NME1-207ENST00000480143 AQRO60306 1485 aaKnown RBP eCLIP32.12■■■□□ 2.738e-7■■■□□ 16.8
NME1-207ENST00000480143 IGF1RP08069 1367 aa32.11■■■□□ 2.73
NME1-207ENST00000480143 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
NME1-207ENST00000480143 GRIN2BQ13224 1484 aa32.1■■■□□ 2.73
NME1-207ENST00000480143 EIF4G3O43432 1585 aaKnown RBP32.08■■■□□ 2.73
NME1-207ENST00000480143 FAM9AQ8IZU1 332 aaPredicted RBP32.04■■■□□ 2.72
NME1-207ENST00000480143 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
NME1-207ENST00000480143 CUL7Q14999 1698 aa31.95■■■□□ 2.7
NME1-207ENST00000480143 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
NME1-207ENST00000480143 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
NME1-207ENST00000480143 CARMIL1Q5VZK9 1371 aa31.94■■■□□ 2.7
NME1-207ENST00000480143 FHAD1B1AJZ9 1412 aa31.9■■■□□ 2.7
NME1-207ENST00000480143 KIF21BO75037 1637 aa31.86■■■□□ 2.69
NME1-207ENST00000480143 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
NME1-207ENST00000480143 RAPGEF2Q9Y4G8 1499 aa31.84■■■□□ 2.69
NME1-207ENST00000480143 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
NME1-207ENST00000480143 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
NME1-207ENST00000480143 GOLGA3Q08378 1498 aa31.76■■■□□ 2.67
NME1-207ENST00000480143 CHMP7Q8WUX9 453 aaPredicted RBP31.7■■■□□ 2.67
NME1-207ENST00000480143 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
NME1-207ENST00000480143 LOC105371045A0A1W2PR82 267 aa31.58■■■□□ 2.65
NME1-207ENST00000480143 TNIKQ9UKE5 1360 aa31.57■■■□□ 2.64
NME1-207ENST00000480143 UBTFP17480 764 aaKnown RBP31.57■■■□□ 2.64
NME1-207ENST00000480143 FBLN2P98095 1184 aa31.56■■■□□ 2.64
NME1-207ENST00000480143 NUP160Q12769 1436 aa31.51■■■□□ 2.64
NME1-207ENST00000480143 CHD1O14646 1710 aa31.46■■■□□ 2.63
NME1-207ENST00000480143 KIAA0586Q9BVV6 1533 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms