RNA–Protein interactions for RNA: ENST00000460332.1

NOM1-202, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 3

Gene NOM1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-202ENST00000460332 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
NOM1-202ENST00000460332 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
NOM1-202ENST00000460332 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
NOM1-202ENST00000460332 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
NOM1-202ENST00000460332 FOXD1Q16676 465 aa17.26■□□□□ 0.35
NOM1-202ENST00000460332 MSH5O43196 834 aa16.3■□□□□ 0.2
NOM1-202ENST00000460332 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
NOM1-202ENST00000460332 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
NOM1-202ENST00000460332 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
NOM1-202ENST00000460332 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
NOM1-202ENST00000460332 ADRA2BP18089 450 aa15.89■□□□□ 0.13
NOM1-202ENST00000460332 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
NOM1-202ENST00000460332 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
NOM1-202ENST00000460332 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
NOM1-202ENST00000460332 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
NOM1-202ENST00000460332 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
NOM1-202ENST00000460332 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
NOM1-202ENST00000460332 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
NOM1-202ENST00000460332 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
NOM1-202ENST00000460332 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
NOM1-202ENST00000460332 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
NOM1-202ENST00000460332 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
NOM1-202ENST00000460332 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
NOM1-202ENST00000460332 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
NOM1-202ENST00000460332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.279e-8■■■■■ 27.3
NOM1-202ENST00000460332 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
NOM1-202ENST00000460332 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
NOM1-202ENST00000460332 CAPN15O75808 1086 aa12.93□□□□□ -0.34
NOM1-202ENST00000460332 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
NOM1-202ENST00000460332 DSG3P32926 999 aa12.89□□□□□ -0.35
NOM1-202ENST00000460332 KCNA4P22459 653 aa12.87□□□□□ -0.35
NOM1-202ENST00000460332 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
NOM1-202ENST00000460332 APLP2Q06481 763 aa12.76□□□□□ -0.37
NOM1-202ENST00000460332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
NOM1-202ENST00000460332 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
NOM1-202ENST00000460332 POTEHQ6S545 545 aa12.68□□□□□ -0.38
NOM1-202ENST00000460332 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
NOM1-202ENST00000460332 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
NOM1-202ENST00000460332 ABCB7O75027 752 aa12.58□□□□□ -0.4
NOM1-202ENST00000460332 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
NOM1-202ENST00000460332 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
NOM1-202ENST00000460332 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
NOM1-202ENST00000460332 POLA2Q14181 598 aa12.27□□□□□ -0.45
NOM1-202ENST00000460332 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
NOM1-202ENST00000460332 SLC4A1APQ9BWU0 796 aaKnown RBP12.14□□□□□ -0.47
NOM1-202ENST00000460332 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
NOM1-202ENST00000460332 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
NOM1-202ENST00000460332 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
NOM1-202ENST00000460332 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
NOM1-202ENST00000460332 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
NOM1-202ENST00000460332 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
NOM1-202ENST00000460332 ZBTB22O15209 634 aa11.8□□□□□ -0.52
NOM1-202ENST00000460332 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
NOM1-202ENST00000460332 SP7Q8TDD2 431 aaPredicted RBP11.8□□□□□ -0.52
NOM1-202ENST00000460332 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
NOM1-202ENST00000460332 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
NOM1-202ENST00000460332 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
NOM1-202ENST00000460332 FBLN2P98095 1184 aa11.67□□□□□ -0.54
NOM1-202ENST00000460332 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
NOM1-202ENST00000460332 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
NOM1-202ENST00000460332 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
NOM1-202ENST00000460332 HAX1O00165 279 aa11.65□□□□□ -0.54
NOM1-202ENST00000460332 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
NOM1-202ENST00000460332 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
NOM1-202ENST00000460332 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
NOM1-202ENST00000460332 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
NOM1-202ENST00000460332 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
NOM1-202ENST00000460332 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
NOM1-202ENST00000460332 EVX2Q03828 476 aa11.42□□□□□ -0.58
NOM1-202ENST00000460332 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
NOM1-202ENST00000460332 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
NOM1-202ENST00000460332 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
NOM1-202ENST00000460332 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
NOM1-202ENST00000460332 GABBR2O75899 941 aa11.2□□□□□ -0.62
NOM1-202ENST00000460332 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
NOM1-202ENST00000460332 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
NOM1-202ENST00000460332 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
NOM1-202ENST00000460332 LHX8Q68G74 356 aa11.06□□□□□ -0.64
NOM1-202ENST00000460332 CLCN6P51797 869 aa11.04□□□□□ -0.64
NOM1-202ENST00000460332 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
NOM1-202ENST00000460332 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
NOM1-202ENST00000460332 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
NOM1-202ENST00000460332 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
NOM1-202ENST00000460332 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
NOM1-202ENST00000460332 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
NOM1-202ENST00000460332 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
NOM1-202ENST00000460332 EHMT2Q96KQ7 1210 aa10.83□□□□□ -0.68
NOM1-202ENST00000460332 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
NOM1-202ENST00000460332 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
NOM1-202ENST00000460332 GALR2O43603 387 aaPredicted RBP10.75□□□□□ -0.69
NOM1-202ENST00000460332 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
NOM1-202ENST00000460332 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
NOM1-202ENST00000460332 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
NOM1-202ENST00000460332 PROM2Q8N271 834 aa10.57□□□□□ -0.72
NOM1-202ENST00000460332 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
NOM1-202ENST00000460332 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
NOM1-202ENST00000460332 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
NOM1-202ENST00000460332 ASTLQ6HA08 431 aaPredicted RBP10.54□□□□□ -0.72
NOM1-202ENST00000460332 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
NOM1-202ENST00000460332 C7P10643 843 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms