RNA–Protein interactions for RNA: ENST00000457958.6

LINC00511-202, long intergenic non-protein coding RNA 511, humanhuman

TSL 1 (best) BASIC

Gene LINC00511, Length 1,696 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-202ENST00000457958 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
LINC00511-202ENST00000457958 ABCC9O60706 1549 aa24.46■■□□□ 1.51
LINC00511-202ENST00000457958 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
LINC00511-202ENST00000457958 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
LINC00511-202ENST00000457958 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.43
LINC00511-202ENST00000457958 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
LINC00511-202ENST00000457958 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
LINC00511-202ENST00000457958 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.28
LINC00511-202ENST00000457958 NACADO15069 1562 aa22.86■■□□□ 1.25
LINC00511-202ENST00000457958 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
LINC00511-202ENST00000457958 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
LINC00511-202ENST00000457958 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
LINC00511-202ENST00000457958 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
LINC00511-202ENST00000457958 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
LINC00511-202ENST00000457958 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
LINC00511-202ENST00000457958 MYO15BQ96JP2 1530 aa22.45■■□□□ 1.18
LINC00511-202ENST00000457958 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
LINC00511-202ENST00000457958 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
LINC00511-202ENST00000457958 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
LINC00511-202ENST00000457958 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
LINC00511-202ENST00000457958 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
LINC00511-202ENST00000457958 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
LINC00511-202ENST00000457958 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
LINC00511-202ENST00000457958 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
LINC00511-202ENST00000457958 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
LINC00511-202ENST00000457958 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
LINC00511-202ENST00000457958 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
LINC00511-202ENST00000457958 CUX2O14529 1486 aa21.13■□□□□ 0.97
LINC00511-202ENST00000457958 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
LINC00511-202ENST00000457958 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
LINC00511-202ENST00000457958 WIZO95785 1651 aa21■□□□□ 0.95
LINC00511-202ENST00000457958 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
LINC00511-202ENST00000457958 NESP48681 1621 aa20.96■□□□□ 0.95
LINC00511-202ENST00000457958 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
LINC00511-202ENST00000457958 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
LINC00511-202ENST00000457958 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
LINC00511-202ENST00000457958 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
LINC00511-202ENST00000457958 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
LINC00511-202ENST00000457958 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
LINC00511-202ENST00000457958 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
LINC00511-202ENST00000457958 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
LINC00511-202ENST00000457958 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
LINC00511-202ENST00000457958 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
LINC00511-202ENST00000457958 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.89
LINC00511-202ENST00000457958 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
LINC00511-202ENST00000457958 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
LINC00511-202ENST00000457958 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.86
LINC00511-202ENST00000457958 WDR62O43379 1518 aa20.39■□□□□ 0.85
LINC00511-202ENST00000457958 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
LINC00511-202ENST00000457958 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
LINC00511-202ENST00000457958 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.83
LINC00511-202ENST00000457958 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
LINC00511-202ENST00000457958 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
LINC00511-202ENST00000457958 CFTRP13569 1480 aa20.21■□□□□ 0.83
LINC00511-202ENST00000457958 EEA1Q15075 1411 aa20.2■□□□□ 0.82
LINC00511-202ENST00000457958 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
LINC00511-202ENST00000457958 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
LINC00511-202ENST00000457958 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.82
LINC00511-202ENST00000457958 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
LINC00511-202ENST00000457958 SYNJ1O43426 1573 aa20■□□□□ 0.79
LINC00511-202ENST00000457958 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
LINC00511-202ENST00000457958 SOGA1O94964 1423 aa19.98■□□□□ 0.79
LINC00511-202ENST00000457958 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
LINC00511-202ENST00000457958 ZNF608Q9ULD9 1512 aaPredicted RBP19.96■□□□□ 0.79
LINC00511-202ENST00000457958 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
LINC00511-202ENST00000457958 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
LINC00511-202ENST00000457958 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
LINC00511-202ENST00000457958 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
LINC00511-202ENST00000457958 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
LINC00511-202ENST00000457958 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
LINC00511-202ENST00000457958 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
LINC00511-202ENST00000457958 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
LINC00511-202ENST00000457958 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
LINC00511-202ENST00000457958 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
LINC00511-202ENST00000457958 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
LINC00511-202ENST00000457958 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
LINC00511-202ENST00000457958 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
LINC00511-202ENST00000457958 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
LINC00511-202ENST00000457958 KIF21BO75037 1637 aa19.83■□□□□ 0.76
LINC00511-202ENST00000457958 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
LINC00511-202ENST00000457958 CUX1P39880 1505 aa19.76■□□□□ 0.75
LINC00511-202ENST00000457958 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
LINC00511-202ENST00000457958 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
LINC00511-202ENST00000457958 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
LINC00511-202ENST00000457958 HRCP23327 699 aa19.74■□□□□ 0.75
LINC00511-202ENST00000457958 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC00511-202ENST00000457958 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
LINC00511-202ENST00000457958 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
LINC00511-202ENST00000457958 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
LINC00511-202ENST00000457958 CHD1O14646 1710 aa19.66■□□□□ 0.74
LINC00511-202ENST00000457958 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
LINC00511-202ENST00000457958 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
LINC00511-202ENST00000457958 FBLN2P98095 1184 aa19.64■□□□□ 0.73
LINC00511-202ENST00000457958 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
LINC00511-202ENST00000457958 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
LINC00511-202ENST00000457958 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
LINC00511-202ENST00000457958 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
LINC00511-202ENST00000457958 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
LINC00511-202ENST00000457958 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
LINC00511-202ENST00000457958 CLIP1P30622 1438 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms