RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
CDCA2-202ENST00000380665 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
CDCA2-202ENST00000380665 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
CDCA2-202ENST00000380665 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
CDCA2-202ENST00000380665 EHMT2Q96KQ7 1210 aa21.92■■□□□ 1.1
CDCA2-202ENST00000380665 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
CDCA2-202ENST00000380665 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
CDCA2-202ENST00000380665 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
CDCA2-202ENST00000380665 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
CDCA2-202ENST00000380665 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
CDCA2-202ENST00000380665 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
CDCA2-202ENST00000380665 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
CDCA2-202ENST00000380665 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
CDCA2-202ENST00000380665 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
CDCA2-202ENST00000380665 ABCC9O60706 1549 aa20.87■□□□□ 0.93
CDCA2-202ENST00000380665 HRCP23327 699 aa20.75■□□□□ 0.91
CDCA2-202ENST00000380665 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
CDCA2-202ENST00000380665 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
CDCA2-202ENST00000380665 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
CDCA2-202ENST00000380665 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDCA2-202ENST00000380665 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
CDCA2-202ENST00000380665 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.84
CDCA2-202ENST00000380665 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
CDCA2-202ENST00000380665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
CDCA2-202ENST00000380665 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
CDCA2-202ENST00000380665 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
CDCA2-202ENST00000380665 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
CDCA2-202ENST00000380665 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
CDCA2-202ENST00000380665 APLP2Q06481 763 aa19.94■□□□□ 0.78
CDCA2-202ENST00000380665 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
CDCA2-202ENST00000380665 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
CDCA2-202ENST00000380665 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
CDCA2-202ENST00000380665 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
CDCA2-202ENST00000380665 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
CDCA2-202ENST00000380665 ITGAEP38570 1179 aa19.78■□□□□ 0.76
CDCA2-202ENST00000380665 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
CDCA2-202ENST00000380665 WIZO95785 1651 aa19.64■□□□□ 0.73
CDCA2-202ENST00000380665 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
CDCA2-202ENST00000380665 NACADO15069 1562 aa19.56■□□□□ 0.72
CDCA2-202ENST00000380665 SOGA1O94964 1423 aa19.54■□□□□ 0.72
CDCA2-202ENST00000380665 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.72
CDCA2-202ENST00000380665 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
CDCA2-202ENST00000380665 P3H3Q8IVL6 736 aa19.41■□□□□ 0.7
CDCA2-202ENST00000380665 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
CDCA2-202ENST00000380665 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
CDCA2-202ENST00000380665 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
CDCA2-202ENST00000380665 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.69
CDCA2-202ENST00000380665 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
CDCA2-202ENST00000380665 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
CDCA2-202ENST00000380665 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
CDCA2-202ENST00000380665 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
CDCA2-202ENST00000380665 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
CDCA2-202ENST00000380665 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
CDCA2-202ENST00000380665 ZNF316A6NFI3 1004 aaPredicted RBP19.16■□□□□ 0.66
CDCA2-202ENST00000380665 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CDCA2-202ENST00000380665 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
CDCA2-202ENST00000380665 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
CDCA2-202ENST00000380665 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
CDCA2-202ENST00000380665 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
CDCA2-202ENST00000380665 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
CDCA2-202ENST00000380665 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
CDCA2-202ENST00000380665 MIER1Q8N108 512 aa19.06■□□□□ 0.64
CDCA2-202ENST00000380665 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
CDCA2-202ENST00000380665 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
CDCA2-202ENST00000380665 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
CDCA2-202ENST00000380665 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
CDCA2-202ENST00000380665 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
CDCA2-202ENST00000380665 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
CDCA2-202ENST00000380665 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
CDCA2-202ENST00000380665 EEA1Q15075 1411 aa18.86■□□□□ 0.61
CDCA2-202ENST00000380665 BCANQ96GW7 911 aa18.85■□□□□ 0.61
CDCA2-202ENST00000380665 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
CDCA2-202ENST00000380665 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
CDCA2-202ENST00000380665 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
CDCA2-202ENST00000380665 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
CDCA2-202ENST00000380665 FBLN2P98095 1184 aa18.73■□□□□ 0.59
CDCA2-202ENST00000380665 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
CDCA2-202ENST00000380665 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
CDCA2-202ENST00000380665 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
CDCA2-202ENST00000380665 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
CDCA2-202ENST00000380665 CUX2O14529 1486 aa18.68■□□□□ 0.58
CDCA2-202ENST00000380665 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
CDCA2-202ENST00000380665 UNC13AQ9UPW8 1703 aa18.62■□□□□ 0.57
CDCA2-202ENST00000380665 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
CDCA2-202ENST00000380665 ZNF326Q5BKZ1 582 aaKnown RBP18.59■□□□□ 0.57
CDCA2-202ENST00000380665 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
CDCA2-202ENST00000380665 KCNH8Q96L42 1107 aa18.57■□□□□ 0.56
CDCA2-202ENST00000380665 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
CDCA2-202ENST00000380665 CARMIL1Q5VZK9 1371 aa18.57■□□□□ 0.56
CDCA2-202ENST00000380665 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CDCA2-202ENST00000380665 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
CDCA2-202ENST00000380665 CCNB3Q8WWL7 1395 aa18.52■□□□□ 0.56
CDCA2-202ENST00000380665 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
CDCA2-202ENST00000380665 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
CDCA2-202ENST00000380665 KIF21BO75037 1637 aa18.48■□□□□ 0.55
CDCA2-202ENST00000380665 NEFLP07196 543 aa18.46■□□□□ 0.55
CDCA2-202ENST00000380665 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
CDCA2-202ENST00000380665 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
CDCA2-202ENST00000380665 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
CDCA2-202ENST00000380665 FHOD3Q2V2M9 1422 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms