RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
NPLOC4-203ENST00000570300 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
NPLOC4-203ENST00000570300 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
NPLOC4-203ENST00000570300 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
NPLOC4-203ENST00000570300 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
NPLOC4-203ENST00000570300 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
NPLOC4-203ENST00000570300 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
NPLOC4-203ENST00000570300 ABCC9O60706 1549 aa20.87■□□□□ 0.93
NPLOC4-203ENST00000570300 NACADO15069 1562 aa20.69■□□□□ 0.9
NPLOC4-203ENST00000570300 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
NPLOC4-203ENST00000570300 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
NPLOC4-203ENST00000570300 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
NPLOC4-203ENST00000570300 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
NPLOC4-203ENST00000570300 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
NPLOC4-203ENST00000570300 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
NPLOC4-203ENST00000570300 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
NPLOC4-203ENST00000570300 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
NPLOC4-203ENST00000570300 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
NPLOC4-203ENST00000570300 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
NPLOC4-203ENST00000570300 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
NPLOC4-203ENST00000570300 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
NPLOC4-203ENST00000570300 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
NPLOC4-203ENST00000570300 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
NPLOC4-203ENST00000570300 PEG3Q9GZU2 1588 aa19.34■□□□□ 0.69
NPLOC4-203ENST00000570300 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
NPLOC4-203ENST00000570300 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
NPLOC4-203ENST00000570300 WIZO95785 1651 aa19.28■□□□□ 0.68
NPLOC4-203ENST00000570300 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
NPLOC4-203ENST00000570300 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
NPLOC4-203ENST00000570300 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
NPLOC4-203ENST00000570300 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
NPLOC4-203ENST00000570300 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
NPLOC4-203ENST00000570300 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
NPLOC4-203ENST00000570300 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
NPLOC4-203ENST00000570300 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
NPLOC4-203ENST00000570300 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
NPLOC4-203ENST00000570300 CFTRP13569 1480 aa18.61■□□□□ 0.57
NPLOC4-203ENST00000570300 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
NPLOC4-203ENST00000570300 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
NPLOC4-203ENST00000570300 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
NPLOC4-203ENST00000570300 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
NPLOC4-203ENST00000570300 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
NPLOC4-203ENST00000570300 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
NPLOC4-203ENST00000570300 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
NPLOC4-203ENST00000570300 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
NPLOC4-203ENST00000570300 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
NPLOC4-203ENST00000570300 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
NPLOC4-203ENST00000570300 NESP48681 1621 aa18.3■□□□□ 0.52
NPLOC4-203ENST00000570300 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
NPLOC4-203ENST00000570300 CUX1P39880 1505 aa18.23■□□□□ 0.51
NPLOC4-203ENST00000570300 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
NPLOC4-203ENST00000570300 EEA1Q15075 1411 aa18.18■□□□□ 0.5
NPLOC4-203ENST00000570300 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
NPLOC4-203ENST00000570300 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
NPLOC4-203ENST00000570300 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
NPLOC4-203ENST00000570300 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
NPLOC4-203ENST00000570300 SOGA1O94964 1423 aa18.07■□□□□ 0.48
NPLOC4-203ENST00000570300 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
NPLOC4-203ENST00000570300 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
NPLOC4-203ENST00000570300 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
NPLOC4-203ENST00000570300 FOXD1Q16676 465 aa17.99■□□□□ 0.47
NPLOC4-203ENST00000570300 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
NPLOC4-203ENST00000570300 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
NPLOC4-203ENST00000570300 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
NPLOC4-203ENST00000570300 WDR62O43379 1518 aa17.97■□□□□ 0.47
NPLOC4-203ENST00000570300 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
NPLOC4-203ENST00000570300 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
NPLOC4-203ENST00000570300 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
NPLOC4-203ENST00000570300 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
NPLOC4-203ENST00000570300 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
NPLOC4-203ENST00000570300 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
NPLOC4-203ENST00000570300 KIF21BO75037 1637 aa17.9■□□□□ 0.46
NPLOC4-203ENST00000570300 CUX2O14529 1486 aa17.89■□□□□ 0.45
NPLOC4-203ENST00000570300 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
NPLOC4-203ENST00000570300 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
NPLOC4-203ENST00000570300 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
NPLOC4-203ENST00000570300 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
NPLOC4-203ENST00000570300 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
NPLOC4-203ENST00000570300 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
NPLOC4-203ENST00000570300 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
NPLOC4-203ENST00000570300 IGF1RP08069 1367 aa17.82■□□□□ 0.44
NPLOC4-203ENST00000570300 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
NPLOC4-203ENST00000570300 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
NPLOC4-203ENST00000570300 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
NPLOC4-203ENST00000570300 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
NPLOC4-203ENST00000570300 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
NPLOC4-203ENST00000570300 CUL7Q14999 1698 aa17.73■□□□□ 0.43
NPLOC4-203ENST00000570300 CARMIL1Q5VZK9 1371 aa17.71■□□□□ 0.43
NPLOC4-203ENST00000570300 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
NPLOC4-203ENST00000570300 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
NPLOC4-203ENST00000570300 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
NPLOC4-203ENST00000570300 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
NPLOC4-203ENST00000570300 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
NPLOC4-203ENST00000570300 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
NPLOC4-203ENST00000570300 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.414e-14■■■■■ 28.1
NPLOC4-203ENST00000570300 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
NPLOC4-203ENST00000570300 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
NPLOC4-203ENST00000570300 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
NPLOC4-203ENST00000570300 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
NPLOC4-203ENST00000570300 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms