Protein–RNA interactions for Protein: Q9Y5F8

PCDHGB7, Protocadherin gamma-B7, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7Q9Y5F8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGB7Q9Y5F8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGB7Q9Y5F8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHGB7Q9Y5F8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGB7Q9Y5F8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB7Q9Y5F8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB7Q9Y5F8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHGB7Q9Y5F8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHGB7Q9Y5F8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB7Q9Y5F8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB7Q9Y5F8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB7Q9Y5F8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB7Q9Y5F8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHGB7Q9Y5F8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB7Q9Y5F8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB7Q9Y5F8 DUX4L29-201ENST00000425409 679 ntBASIC25■■□□□ 1.59
PCDHGB7Q9Y5F8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB7Q9Y5F8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHGB7Q9Y5F8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB7Q9Y5F8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB7Q9Y5F8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB7Q9Y5F8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGB7Q9Y5F8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHGB7Q9Y5F8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGB7Q9Y5F8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.94■■□□□ 1.58
PCDHGB7Q9Y5F8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGB7Q9Y5F8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHGB7Q9Y5F8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGB7Q9Y5F8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB7Q9Y5F8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.93■■□□□ 1.58
PCDHGB7Q9Y5F8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGB7Q9Y5F8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PCDHGB7Q9Y5F8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHGB7Q9Y5F8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGB7Q9Y5F8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PCDHGB7Q9Y5F8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGB7Q9Y5F8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGB7Q9Y5F8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGB7Q9Y5F8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGB7Q9Y5F8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGB7Q9Y5F8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGB7Q9Y5F8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGB7Q9Y5F8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB7Q9Y5F8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PCDHGB7Q9Y5F8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHGB7Q9Y5F8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDHGB7Q9Y5F8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 AC108673.1-201ENST00000510422 1159 ntBASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB7Q9Y5F8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB7Q9Y5F8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.83■■□□□ 1.57
PCDHGB7Q9Y5F8 AC021231.2-201ENST00000594613 730 ntBASIC24.82■■□□□ 1.56
PCDHGB7Q9Y5F8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGB7Q9Y5F8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGB7Q9Y5F8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGB7Q9Y5F8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGB7Q9Y5F8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PCDHGB7Q9Y5F8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGB7Q9Y5F8 MIR4449-201ENST00000578365 66 ntBASIC24.8■■□□□ 1.56
PCDHGB7Q9Y5F8 MIR639-201ENST00000384974 98 ntBASIC24.79■■□□□ 1.56
PCDHGB7Q9Y5F8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.79■■□□□ 1.56
PCDHGB7Q9Y5F8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB7Q9Y5F8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB7Q9Y5F8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDHGB7Q9Y5F8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB7Q9Y5F8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB7Q9Y5F8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB7Q9Y5F8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHGB7Q9Y5F8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB7Q9Y5F8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB7Q9Y5F8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB7Q9Y5F8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHGB7Q9Y5F8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHGB7Q9Y5F8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB7Q9Y5F8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms