Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CTDP1Q9Y5B0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31■■■□□ 2.55
CTDP1Q9Y5B0 ZNRF2P2-203ENST00000454624 420 ntBASIC31■■■□□ 2.55
CTDP1Q9Y5B0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CTDP1Q9Y5B0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CTDP1Q9Y5B0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.99■■■□□ 2.55
CTDP1Q9Y5B0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CTDP1Q9Y5B0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.99■■■□□ 2.55
CTDP1Q9Y5B0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CTDP1Q9Y5B0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CTDP1Q9Y5B0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CTDP1Q9Y5B0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.98■■■□□ 2.55
CTDP1Q9Y5B0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.97■■■□□ 2.55
CTDP1Q9Y5B0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CTDP1Q9Y5B0 AC108673.1-201ENST00000510422 1159 ntBASIC30.96■■■□□ 2.55
CTDP1Q9Y5B0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CTDP1Q9Y5B0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CTDP1Q9Y5B0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CTDP1Q9Y5B0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CTDP1Q9Y5B0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CTDP1Q9Y5B0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.94■■■□□ 2.54
CTDP1Q9Y5B0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.94■■■□□ 2.54
CTDP1Q9Y5B0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CTDP1Q9Y5B0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CTDP1Q9Y5B0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.92■■■□□ 2.54
CTDP1Q9Y5B0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CTDP1Q9Y5B0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.89■■■□□ 2.54
CTDP1Q9Y5B0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.88■■■□□ 2.53
CTDP1Q9Y5B0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
CTDP1Q9Y5B0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CTDP1Q9Y5B0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CTDP1Q9Y5B0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CTDP1Q9Y5B0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CTDP1Q9Y5B0 HLA-V-202ENST00000446817 847 ntBASIC30.86■■■□□ 2.53
CTDP1Q9Y5B0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CTDP1Q9Y5B0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.85■■■□□ 2.53
CTDP1Q9Y5B0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CTDP1Q9Y5B0 AC021231.2-201ENST00000594613 730 ntBASIC30.84■■■□□ 2.53
CTDP1Q9Y5B0 MIR6090-201ENST00000622481 60 ntBASIC30.84■■■□□ 2.53
CTDP1Q9Y5B0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
CTDP1Q9Y5B0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.84■■■□□ 2.53
CTDP1Q9Y5B0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CTDP1Q9Y5B0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.83■■■□□ 2.53
CTDP1Q9Y5B0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CTDP1Q9Y5B0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
CTDP1Q9Y5B0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CTDP1Q9Y5B0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CTDP1Q9Y5B0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.81■■■□□ 2.52
CTDP1Q9Y5B0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CTDP1Q9Y5B0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.8■■■□□ 2.52
CTDP1Q9Y5B0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CTDP1Q9Y5B0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CTDP1Q9Y5B0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CTDP1Q9Y5B0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.77■■■□□ 2.52
CTDP1Q9Y5B0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
CTDP1Q9Y5B0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CTDP1Q9Y5B0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.75■■■□□ 2.51
CTDP1Q9Y5B0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CTDP1Q9Y5B0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
CTDP1Q9Y5B0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CTDP1Q9Y5B0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CTDP1Q9Y5B0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CTDP1Q9Y5B0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CTDP1Q9Y5B0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.73■■■□□ 2.51
CTDP1Q9Y5B0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CTDP1Q9Y5B0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CTDP1Q9Y5B0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.71■■■□□ 2.51
CTDP1Q9Y5B0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CTDP1Q9Y5B0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CTDP1Q9Y5B0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CTDP1Q9Y5B0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CTDP1Q9Y5B0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CTDP1Q9Y5B0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CTDP1Q9Y5B0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CTDP1Q9Y5B0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.65■■■□□ 2.5
CTDP1Q9Y5B0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.65■■■□□ 2.5
CTDP1Q9Y5B0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
CTDP1Q9Y5B0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
CTDP1Q9Y5B0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.64■■■□□ 2.5
CTDP1Q9Y5B0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CTDP1Q9Y5B0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CTDP1Q9Y5B0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CTDP1Q9Y5B0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CTDP1Q9Y5B0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CTDP1Q9Y5B0 AL161658.1-201ENST00000623641 1967 ntBASIC30.61■■■□□ 2.49
CTDP1Q9Y5B0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CTDP1Q9Y5B0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CTDP1Q9Y5B0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CTDP1Q9Y5B0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.6■■■□□ 2.49
CTDP1Q9Y5B0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CTDP1Q9Y5B0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CTDP1Q9Y5B0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.59■■■□□ 2.49
CTDP1Q9Y5B0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CTDP1Q9Y5B0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CTDP1Q9Y5B0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CTDP1Q9Y5B0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
CTDP1Q9Y5B0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CTDP1Q9Y5B0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.56■■■□□ 2.48
CTDP1Q9Y5B0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
CTDP1Q9Y5B0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms