Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHB8Q9UN66 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHB8Q9UN66 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.6■■■□□ 2.17
PCDHB8Q9UN66 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PCDHB8Q9UN66 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHB8Q9UN66 ABHD17AP4-201ENST00000411545 909 ntBASIC28.59■■■□□ 2.17
PCDHB8Q9UN66 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHB8Q9UN66 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHB8Q9UN66 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHB8Q9UN66 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHB8Q9UN66 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDHB8Q9UN66 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHB8Q9UN66 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHB8Q9UN66 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHB8Q9UN66 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHB8Q9UN66 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.53■■■□□ 2.16
PCDHB8Q9UN66 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.53■■■□□ 2.16
PCDHB8Q9UN66 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
PCDHB8Q9UN66 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCDHB8Q9UN66 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHB8Q9UN66 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHB8Q9UN66 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHB8Q9UN66 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHB8Q9UN66 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.5■■■□□ 2.15
PCDHB8Q9UN66 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.5■■■□□ 2.15
PCDHB8Q9UN66 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.5■■■□□ 2.15
PCDHB8Q9UN66 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHB8Q9UN66 AC108673.1-201ENST00000510422 1159 ntBASIC28.48■■■□□ 2.15
PCDHB8Q9UN66 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PCDHB8Q9UN66 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHB8Q9UN66 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHB8Q9UN66 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.46■■■□□ 2.15
PCDHB8Q9UN66 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.46■■■□□ 2.15
PCDHB8Q9UN66 MIR7108-201ENST00000614319 87 ntBASIC28.44■■■□□ 2.14
PCDHB8Q9UN66 MIR6090-201ENST00000622481 60 ntBASIC28.44■■■□□ 2.14
PCDHB8Q9UN66 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHB8Q9UN66 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDHB8Q9UN66 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDHB8Q9UN66 AL161658.1-201ENST00000623641 1967 ntBASIC28.41■■■□□ 2.14
PCDHB8Q9UN66 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDHB8Q9UN66 DUX4L29-201ENST00000425409 679 ntBASIC28.41■■■□□ 2.14
PCDHB8Q9UN66 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.41■■■□□ 2.14
PCDHB8Q9UN66 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
PCDHB8Q9UN66 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHB8Q9UN66 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHB8Q9UN66 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PCDHB8Q9UN66 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCDHB8Q9UN66 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHB8Q9UN66 ZNRF2P2-203ENST00000454624 420 ntBASIC28.38■■■□□ 2.13
PCDHB8Q9UN66 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHB8Q9UN66 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHB8Q9UN66 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB8Q9UN66 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB8Q9UN66 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB8Q9UN66 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB8Q9UN66 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
PCDHB8Q9UN66 AC021231.2-201ENST00000594613 730 ntBASIC28.36■■■□□ 2.13
PCDHB8Q9UN66 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHB8Q9UN66 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHB8Q9UN66 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.35■■■□□ 2.13
PCDHB8Q9UN66 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHB8Q9UN66 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHB8Q9UN66 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHB8Q9UN66 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHB8Q9UN66 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHB8Q9UN66 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHB8Q9UN66 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDHB8Q9UN66 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
PCDHB8Q9UN66 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PCDHB8Q9UN66 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.31■■■□□ 2.12
PCDHB8Q9UN66 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PCDHB8Q9UN66 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHB8Q9UN66 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.3■■■□□ 2.12
PCDHB8Q9UN66 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB8Q9UN66 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB8Q9UN66 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB8Q9UN66 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB8Q9UN66 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDHB8Q9UN66 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB8Q9UN66 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB8Q9UN66 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB8Q9UN66 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB8Q9UN66 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB8Q9UN66 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHB8Q9UN66 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHB8Q9UN66 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHB8Q9UN66 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHB8Q9UN66 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHB8Q9UN66 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHB8Q9UN66 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
PCDHB8Q9UN66 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
PCDHB8Q9UN66 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHB8Q9UN66 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHB8Q9UN66 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms