Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LRIT1Q9P2V4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.04■■□□□ 1.76
LRIT1Q9P2V4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.03■■□□□ 1.76
LRIT1Q9P2V4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LRIT1Q9P2V4 DUX4L29-201ENST00000425409 679 ntBASIC26.02■■□□□ 1.76
LRIT1Q9P2V4 AC120057.4-201ENST00000624722 1615 ntBASIC26.02■■□□□ 1.76
LRIT1Q9P2V4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LRIT1Q9P2V4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LRIT1Q9P2V4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26■■□□□ 1.75
LRIT1Q9P2V4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26■■□□□ 1.75
LRIT1Q9P2V4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
LRIT1Q9P2V4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LRIT1Q9P2V4 AC108673.1-201ENST00000510422 1159 ntBASIC25.98■■□□□ 1.75
LRIT1Q9P2V4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.98■■□□□ 1.75
LRIT1Q9P2V4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
LRIT1Q9P2V4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LRIT1Q9P2V4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LRIT1Q9P2V4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LRIT1Q9P2V4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.96■■□□□ 1.75
LRIT1Q9P2V4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LRIT1Q9P2V4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LRIT1Q9P2V4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LRIT1Q9P2V4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.96■■□□□ 1.75
LRIT1Q9P2V4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.94■■□□□ 1.74
LRIT1Q9P2V4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LRIT1Q9P2V4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LRIT1Q9P2V4 MIR6090-201ENST00000622481 60 ntBASIC25.93■■□□□ 1.74
LRIT1Q9P2V4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LRIT1Q9P2V4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LRIT1Q9P2V4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.92■■□□□ 1.74
LRIT1Q9P2V4 AC021231.2-201ENST00000594613 730 ntBASIC25.92■■□□□ 1.74
LRIT1Q9P2V4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRIT1Q9P2V4 HLA-V-202ENST00000446817 847 ntBASIC25.91■■□□□ 1.74
LRIT1Q9P2V4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.91■■□□□ 1.74
LRIT1Q9P2V4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LRIT1Q9P2V4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LRIT1Q9P2V4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LRIT1Q9P2V4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.89■■□□□ 1.74
LRIT1Q9P2V4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
LRIT1Q9P2V4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LRIT1Q9P2V4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.89■■□□□ 1.74
LRIT1Q9P2V4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.89■■□□□ 1.74
LRIT1Q9P2V4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.89■■□□□ 1.73
LRIT1Q9P2V4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRIT1Q9P2V4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRIT1Q9P2V4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
LRIT1Q9P2V4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
LRIT1Q9P2V4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.85■■□□□ 1.73
LRIT1Q9P2V4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.85■■□□□ 1.73
LRIT1Q9P2V4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
LRIT1Q9P2V4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LRIT1Q9P2V4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LRIT1Q9P2V4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LRIT1Q9P2V4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
LRIT1Q9P2V4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.82■■□□□ 1.72
LRIT1Q9P2V4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
LRIT1Q9P2V4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LRIT1Q9P2V4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
LRIT1Q9P2V4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LRIT1Q9P2V4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
LRIT1Q9P2V4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
LRIT1Q9P2V4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRIT1Q9P2V4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.78■■□□□ 1.72
LRIT1Q9P2V4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LRIT1Q9P2V4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LRIT1Q9P2V4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
LRIT1Q9P2V4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.76■■□□□ 1.71
LRIT1Q9P2V4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.76■■□□□ 1.71
LRIT1Q9P2V4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRIT1Q9P2V4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRIT1Q9P2V4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRIT1Q9P2V4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
LRIT1Q9P2V4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
LRIT1Q9P2V4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.73■■□□□ 1.71
LRIT1Q9P2V4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.73■■□□□ 1.71
LRIT1Q9P2V4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRIT1Q9P2V4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
LRIT1Q9P2V4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRIT1Q9P2V4 AL161658.1-201ENST00000623641 1967 ntBASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRIT1Q9P2V4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
LRIT1Q9P2V4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRIT1Q9P2V4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRIT1Q9P2V4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRIT1Q9P2V4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRIT1Q9P2V4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRIT1Q9P2V4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRIT1Q9P2V4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRIT1Q9P2V4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.66■■□□□ 1.7
LRIT1Q9P2V4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRIT1Q9P2V4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LRIT1Q9P2V4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.65■■□□□ 1.7
LRIT1Q9P2V4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.65■■□□□ 1.7
LRIT1Q9P2V4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LRIT1Q9P2V4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms