Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.52■■■□□ 2
KDM4CQ9H3R0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.52■■■□□ 2
KDM4CQ9H3R0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
KDM4CQ9H3R0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.51■■□□□ 1.99
KDM4CQ9H3R0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
KDM4CQ9H3R0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
KDM4CQ9H3R0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
KDM4CQ9H3R0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.49■■□□□ 1.99
KDM4CQ9H3R0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
KDM4CQ9H3R0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
KDM4CQ9H3R0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
KDM4CQ9H3R0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
KDM4CQ9H3R0 MIR3665-201ENST00000578708 105 ntBASIC27.45■■□□□ 1.98
KDM4CQ9H3R0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.44■■□□□ 1.98
KDM4CQ9H3R0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KDM4CQ9H3R0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
KDM4CQ9H3R0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.42■■□□□ 1.98
KDM4CQ9H3R0 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.42■■□□□ 1.98
KDM4CQ9H3R0 WASH5P-204ENST00000632292 975 ntBASIC27.41■■□□□ 1.98
KDM4CQ9H3R0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
KDM4CQ9H3R0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
KDM4CQ9H3R0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.4■■□□□ 1.98
KDM4CQ9H3R0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
KDM4CQ9H3R0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KDM4CQ9H3R0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 MIR762-201ENST00000390236 83 ntBASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.37■■□□□ 1.97
KDM4CQ9H3R0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KDM4CQ9H3R0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
KDM4CQ9H3R0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
KDM4CQ9H3R0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM4CQ9H3R0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM4CQ9H3R0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM4CQ9H3R0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM4CQ9H3R0 AC005559.1-201ENST00000589661 871 ntBASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 DUX4L28-201ENST00000623687 678 ntBASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KDM4CQ9H3R0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.28■■□□□ 1.96
KDM4CQ9H3R0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM4CQ9H3R0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 AC087741.3-201ENST00000624270 1347 ntBASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
KDM4CQ9H3R0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
KDM4CQ9H3R0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM4CQ9H3R0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
KDM4CQ9H3R0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
KDM4CQ9H3R0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.22■■□□□ 1.95
KDM4CQ9H3R0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.21■■□□□ 1.95
KDM4CQ9H3R0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.2■■□□□ 1.94
KDM4CQ9H3R0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 AC044849.2-201ENST00000606596 710 ntBASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
KDM4CQ9H3R0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.18■■□□□ 1.94
KDM4CQ9H3R0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KDM4CQ9H3R0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KDM4CQ9H3R0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KDM4CQ9H3R0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.94
KDM4CQ9H3R0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KDM4CQ9H3R0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms