Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NBPF3Q9H094 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NBPF3Q9H094 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.83■■■□□ 2.69
NBPF3Q9H094 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NBPF3Q9H094 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.82■■■□□ 2.68
NBPF3Q9H094 MIR762-201ENST00000390236 83 ntBASIC31.82■■■□□ 2.68
NBPF3Q9H094 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.82■■■□□ 2.68
NBPF3Q9H094 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
NBPF3Q9H094 MIR3665-201ENST00000578708 105 ntBASIC31.81■■■□□ 2.68
NBPF3Q9H094 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF3Q9H094 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF3Q9H094 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.8■■■□□ 2.68
NBPF3Q9H094 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
NBPF3Q9H094 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
NBPF3Q9H094 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.79■■■□□ 2.68
NBPF3Q9H094 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.79■■■□□ 2.68
NBPF3Q9H094 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
NBPF3Q9H094 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.78■■■□□ 2.68
NBPF3Q9H094 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NBPF3Q9H094 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
NBPF3Q9H094 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.77■■■□□ 2.68
NBPF3Q9H094 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NBPF3Q9H094 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.77■■■□□ 2.68
NBPF3Q9H094 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
NBPF3Q9H094 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.76■■■□□ 2.67
NBPF3Q9H094 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NBPF3Q9H094 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.75■■■□□ 2.67
NBPF3Q9H094 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.75■■■□□ 2.67
NBPF3Q9H094 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NBPF3Q9H094 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NBPF3Q9H094 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.74■■■□□ 2.67
NBPF3Q9H094 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
NBPF3Q9H094 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NBPF3Q9H094 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NBPF3Q9H094 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.72■■■□□ 2.67
NBPF3Q9H094 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.72■■■□□ 2.67
NBPF3Q9H094 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
NBPF3Q9H094 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NBPF3Q9H094 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NBPF3Q9H094 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
NBPF3Q9H094 HLA-V-202ENST00000446817 847 ntBASIC31.71■■■□□ 2.67
NBPF3Q9H094 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NBPF3Q9H094 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.7■■■□□ 2.67
NBPF3Q9H094 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
NBPF3Q9H094 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
NBPF3Q9H094 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NBPF3Q9H094 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NBPF3Q9H094 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.69■■■□□ 2.66
NBPF3Q9H094 DUX4L28-201ENST00000623687 678 ntBASIC31.69■■■□□ 2.66
NBPF3Q9H094 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NBPF3Q9H094 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NBPF3Q9H094 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.68■■■□□ 2.66
NBPF3Q9H094 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
NBPF3Q9H094 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NBPF3Q9H094 AC087741.3-201ENST00000624270 1347 ntBASIC31.66■■■□□ 2.66
NBPF3Q9H094 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.66■■■□□ 2.66
NBPF3Q9H094 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NBPF3Q9H094 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NBPF3Q9H094 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.63■■■□□ 2.65
NBPF3Q9H094 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF3Q9H094 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF3Q9H094 AC005559.1-201ENST00000589661 871 ntBASIC31.62■■■□□ 2.65
NBPF3Q9H094 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
NBPF3Q9H094 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
NBPF3Q9H094 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
NBPF3Q9H094 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NBPF3Q9H094 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
NBPF3Q9H094 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NBPF3Q9H094 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
NBPF3Q9H094 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.59■■■□□ 2.65
NBPF3Q9H094 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NBPF3Q9H094 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
NBPF3Q9H094 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.57■■■□□ 2.64
NBPF3Q9H094 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.56■■■□□ 2.64
NBPF3Q9H094 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NBPF3Q9H094 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.54■■■□□ 2.64
NBPF3Q9H094 AC044849.2-201ENST00000606596 710 ntBASIC31.54■■■□□ 2.64
NBPF3Q9H094 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
NBPF3Q9H094 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NBPF3Q9H094 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
NBPF3Q9H094 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NBPF3Q9H094 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NBPF3Q9H094 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NBPF3Q9H094 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.5■■■□□ 2.63
NBPF3Q9H094 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NBPF3Q9H094 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NBPF3Q9H094 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF3Q9H094 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NBPF3Q9H094 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.48■■■□□ 2.63
NBPF3Q9H094 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.47■■■□□ 2.63
NBPF3Q9H094 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
NBPF3Q9H094 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.47■■■□□ 2.63
NBPF3Q9H094 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
NBPF3Q9H094 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
NBPF3Q9H094 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
NBPF3Q9H094 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
NBPF3Q9H094 AL135925.1-201ENST00000605920 1701 ntBASIC31.44■■■□□ 2.62
NBPF3Q9H094 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
NBPF3Q9H094 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NBPF3Q9H094 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms