Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.77■■□□□ 1.72
SLC46A1Q96NT5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SLC46A1Q96NT5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.76■■□□□ 1.71
SLC46A1Q96NT5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SLC46A1Q96NT5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SLC46A1Q96NT5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
SLC46A1Q96NT5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
SLC46A1Q96NT5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SLC46A1Q96NT5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SLC46A1Q96NT5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC46A1Q96NT5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SLC46A1Q96NT5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC46A1Q96NT5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.72■■□□□ 1.71
SLC46A1Q96NT5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC46A1Q96NT5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SLC46A1Q96NT5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC46A1Q96NT5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.71■■□□□ 1.71
SLC46A1Q96NT5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC46A1Q96NT5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC46A1Q96NT5 AC108673.1-201ENST00000510422 1159 ntBASIC25.69■■□□□ 1.7
SLC46A1Q96NT5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.68■■□□□ 1.7
SLC46A1Q96NT5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC46A1Q96NT5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.67■■□□□ 1.7
SLC46A1Q96NT5 MIR3648-2-201ENST00000581792 180 ntBASIC25.66■■□□□ 1.7
SLC46A1Q96NT5 MIR3648-1-201ENST00000615959 180 ntBASIC25.66■■□□□ 1.7
SLC46A1Q96NT5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SLC46A1Q96NT5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC46A1Q96NT5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC46A1Q96NT5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC46A1Q96NT5 MIR6090-201ENST00000622481 60 ntBASIC25.64■■□□□ 1.7
SLC46A1Q96NT5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.64■■□□□ 1.7
SLC46A1Q96NT5 AC016575.1-201ENST00000607026 382 ntBASIC25.63■■□□□ 1.69
SLC46A1Q96NT5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.63■■□□□ 1.69
SLC46A1Q96NT5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLC46A1Q96NT5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC46A1Q96NT5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.62■■□□□ 1.69
SLC46A1Q96NT5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC46A1Q96NT5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC46A1Q96NT5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC46A1Q96NT5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.6■■□□□ 1.69
SLC46A1Q96NT5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC46A1Q96NT5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC46A1Q96NT5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC46A1Q96NT5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC46A1Q96NT5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC46A1Q96NT5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC46A1Q96NT5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC46A1Q96NT5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.58■■□□□ 1.69
SLC46A1Q96NT5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SLC46A1Q96NT5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC46A1Q96NT5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SLC46A1Q96NT5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.56■■□□□ 1.68
SLC46A1Q96NT5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC46A1Q96NT5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 DUX4L11-201ENST00000611504 1267 ntBASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 DUX4L12-201ENST00000614593 1267 ntBASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 LINC01971-201ENST00000617888 1048 ntBASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 DUX4L14-201ENST00000621227 1267 ntBASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC46A1Q96NT5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.54■■□□□ 1.68
SLC46A1Q96NT5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.53■■□□□ 1.68
SLC46A1Q96NT5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC46A1Q96NT5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SLC46A1Q96NT5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SLC46A1Q96NT5 HSD17B1P1-201ENST00000590052 955 ntBASIC25.51■■□□□ 1.67
SLC46A1Q96NT5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC46A1Q96NT5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC46A1Q96NT5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC46A1Q96NT5 CR559946.2-201ENST00000623684 991 ntBASIC25.5■■□□□ 1.67
SLC46A1Q96NT5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC46A1Q96NT5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC46A1Q96NT5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC46A1Q96NT5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC46A1Q96NT5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC46A1Q96NT5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SLC46A1Q96NT5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC46A1Q96NT5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC46A1Q96NT5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC46A1Q96NT5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC46A1Q96NT5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC46A1Q96NT5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.43■■□□□ 1.66
SLC46A1Q96NT5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC46A1Q96NT5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC46A1Q96NT5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
SLC46A1Q96NT5 AC120057.4-201ENST00000624722 1615 ntBASIC25.41■■□□□ 1.66
SLC46A1Q96NT5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.41■■□□□ 1.66
SLC46A1Q96NT5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC46A1Q96NT5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC46A1Q96NT5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.39■■□□□ 1.66
SLC46A1Q96NT5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
SLC46A1Q96NT5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.65
SLC46A1Q96NT5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms