Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.71■■□□□ 1.07
LSM10Q969L4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LSM10Q969L4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
LSM10Q969L4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
LSM10Q969L4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.7■■□□□ 1.06
LSM10Q969L4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LSM10Q969L4 AL135925.1-201ENST00000605920 1701 ntBASIC21.69■■□□□ 1.06
LSM10Q969L4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LSM10Q969L4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSM10Q969L4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LSM10Q969L4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LSM10Q969L4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSM10Q969L4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LSM10Q969L4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.68■■□□□ 1.06
LSM10Q969L4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LSM10Q969L4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM10Q969L4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM10Q969L4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM10Q969L4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LSM10Q969L4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.67■■□□□ 1.06
LSM10Q969L4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSM10Q969L4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
LSM10Q969L4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSM10Q969L4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSM10Q969L4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.66■■□□□ 1.06
LSM10Q969L4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LSM10Q969L4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM10Q969L4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM10Q969L4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM10Q969L4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LSM10Q969L4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.63■■□□□ 1.05
LSM10Q969L4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSM10Q969L4 AC142086.6-201ENST00000621154 1765 ntBASIC21.62■■□□□ 1.05
LSM10Q969L4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LSM10Q969L4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSM10Q969L4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LSM10Q969L4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LSM10Q969L4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
LSM10Q969L4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSM10Q969L4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSM10Q969L4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSM10Q969L4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LSM10Q969L4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSM10Q969L4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSM10Q969L4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.56■■□□□ 1.04
LSM10Q969L4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM10Q969L4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LSM10Q969L4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LSM10Q969L4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM10Q969L4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSM10Q969L4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LSM10Q969L4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSM10Q969L4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.54■■□□□ 1.04
LSM10Q969L4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LSM10Q969L4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM10Q969L4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM10Q969L4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSM10Q969L4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.52■■□□□ 1.04
LSM10Q969L4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LSM10Q969L4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSM10Q969L4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LSM10Q969L4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSM10Q969L4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.52■■□□□ 1.03
LSM10Q969L4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM10Q969L4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.5■■□□□ 1.03
LSM10Q969L4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSM10Q969L4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.49■■□□□ 1.03
LSM10Q969L4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LSM10Q969L4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSM10Q969L4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSM10Q969L4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LSM10Q969L4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.48■■□□□ 1.03
LSM10Q969L4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSM10Q969L4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.48■■□□□ 1.03
LSM10Q969L4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSM10Q969L4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSM10Q969L4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LSM10Q969L4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LSM10Q969L4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.47■■□□□ 1.03
LSM10Q969L4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.46■■□□□ 1.03
LSM10Q969L4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSM10Q969L4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.45■■□□□ 1.02
LSM10Q969L4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LSM10Q969L4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LSM10Q969L4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
LSM10Q969L4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSM10Q969L4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSM10Q969L4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSM10Q969L4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LSM10Q969L4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.43■■□□□ 1.02
LSM10Q969L4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.43■■□□□ 1.02
LSM10Q969L4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.43■■□□□ 1.02
LSM10Q969L4 AL139393.2-201ENST00000608721 2025 ntBASIC21.43■■□□□ 1.02
LSM10Q969L4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSM10Q969L4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms