Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPEB3Q8NE35 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CPEB3Q8NE35 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CPEB3Q8NE35 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPEB3Q8NE35 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPEB3Q8NE35 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CPEB3Q8NE35 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPEB3Q8NE35 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPEB3Q8NE35 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.23■■□□□ 1.31
CPEB3Q8NE35 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPEB3Q8NE35 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPEB3Q8NE35 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPEB3Q8NE35 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPEB3Q8NE35 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.21■■□□□ 1.31
CPEB3Q8NE35 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.21■■□□□ 1.31
CPEB3Q8NE35 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPEB3Q8NE35 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPEB3Q8NE35 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPEB3Q8NE35 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CPEB3Q8NE35 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CPEB3Q8NE35 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPEB3Q8NE35 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPEB3Q8NE35 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPEB3Q8NE35 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.18■■□□□ 1.3
CPEB3Q8NE35 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPEB3Q8NE35 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CPEB3Q8NE35 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPEB3Q8NE35 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPEB3Q8NE35 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPEB3Q8NE35 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPEB3Q8NE35 MIR762-201ENST00000390236 83 ntBASIC23.16■■□□□ 1.3
CPEB3Q8NE35 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPEB3Q8NE35 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPEB3Q8NE35 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPEB3Q8NE35 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CPEB3Q8NE35 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.13■■□□□ 1.29
CPEB3Q8NE35 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPEB3Q8NE35 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.13■■□□□ 1.29
CPEB3Q8NE35 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPEB3Q8NE35 ABCB10P1-201ENST00000614297 2181 ntBASIC23.13■■□□□ 1.29
CPEB3Q8NE35 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CPEB3Q8NE35 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.12■■□□□ 1.29
CPEB3Q8NE35 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CPEB3Q8NE35 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CPEB3Q8NE35 AL135925.1-201ENST00000605920 1701 ntBASIC23.11■■□□□ 1.29
CPEB3Q8NE35 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.11■■□□□ 1.29
CPEB3Q8NE35 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.11■■□□□ 1.29
CPEB3Q8NE35 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPEB3Q8NE35 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.11■■□□□ 1.29
CPEB3Q8NE35 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPEB3Q8NE35 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CPEB3Q8NE35 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPEB3Q8NE35 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CPEB3Q8NE35 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPEB3Q8NE35 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.08■■□□□ 1.29
CPEB3Q8NE35 ST7-AS1-201ENST00000456775 1889 ntBASIC23.07■■□□□ 1.28
CPEB3Q8NE35 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPEB3Q8NE35 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CPEB3Q8NE35 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPEB3Q8NE35 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPEB3Q8NE35 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CPEB3Q8NE35 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.06■■□□□ 1.28
CPEB3Q8NE35 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPEB3Q8NE35 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.05■■□□□ 1.28
CPEB3Q8NE35 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPEB3Q8NE35 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.05■■□□□ 1.28
CPEB3Q8NE35 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPEB3Q8NE35 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPEB3Q8NE35 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPEB3Q8NE35 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CPEB3Q8NE35 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPEB3Q8NE35 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CPEB3Q8NE35 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.03■■□□□ 1.28
CPEB3Q8NE35 AC005559.1-201ENST00000589661 871 ntBASIC23.03■■□□□ 1.28
CPEB3Q8NE35 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPEB3Q8NE35 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPEB3Q8NE35 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPEB3Q8NE35 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPEB3Q8NE35 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23■■□□□ 1.27
CPEB3Q8NE35 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23■■□□□ 1.27
CPEB3Q8NE35 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23■■□□□ 1.27
CPEB3Q8NE35 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPEB3Q8NE35 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPEB3Q8NE35 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.99■■□□□ 1.27
CPEB3Q8NE35 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.99■■□□□ 1.27
CPEB3Q8NE35 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPEB3Q8NE35 AC010864.1-201ENST00000609407 1511 ntBASIC22.98■■□□□ 1.27
CPEB3Q8NE35 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPEB3Q8NE35 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPEB3Q8NE35 DUX4L28-201ENST00000623687 678 ntBASIC22.98■■□□□ 1.27
CPEB3Q8NE35 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CPEB3Q8NE35 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPEB3Q8NE35 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPEB3Q8NE35 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPEB3Q8NE35 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms