Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 RARRES2P7-201ENST00000567349 469 ntBASIC21.3■■□□□ 1
NECAP1Q8NC96 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NECAP1Q8NC96 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.28■■□□□ 1
NECAP1Q8NC96 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.28■■□□□ 1
NECAP1Q8NC96 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.27■■□□□ 1
NECAP1Q8NC96 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NECAP1Q8NC96 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECAP1Q8NC96 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NECAP1Q8NC96 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECAP1Q8NC96 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NECAP1Q8NC96 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NECAP1Q8NC96 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECAP1Q8NC96 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECAP1Q8NC96 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.22■□□□□ 0.99
NECAP1Q8NC96 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
NECAP1Q8NC96 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NECAP1Q8NC96 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECAP1Q8NC96 AL133380.1-201ENST00000506013 324 ntBASIC21.21■□□□□ 0.99
NECAP1Q8NC96 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECAP1Q8NC96 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECAP1Q8NC96 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECAP1Q8NC96 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NECAP1Q8NC96 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NECAP1Q8NC96 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.18■□□□□ 0.98
NECAP1Q8NC96 SETD8P1-201ENST00000623146 1180 ntBASIC21.18■□□□□ 0.98
NECAP1Q8NC96 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NECAP1Q8NC96 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NECAP1Q8NC96 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NECAP1Q8NC96 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NECAP1Q8NC96 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NECAP1Q8NC96 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NECAP1Q8NC96 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NECAP1Q8NC96 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NECAP1Q8NC96 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NECAP1Q8NC96 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NECAP1Q8NC96 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
NECAP1Q8NC96 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECAP1Q8NC96 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NECAP1Q8NC96 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NECAP1Q8NC96 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NECAP1Q8NC96 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NECAP1Q8NC96 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NECAP1Q8NC96 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NECAP1Q8NC96 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECAP1Q8NC96 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECAP1Q8NC96 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 WASH5P-204ENST00000632292 975 ntBASIC21.1■□□□□ 0.97
NECAP1Q8NC96 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECAP1Q8NC96 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAP1Q8NC96 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECAP1Q8NC96 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECAP1Q8NC96 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.08■□□□□ 0.97
NECAP1Q8NC96 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECAP1Q8NC96 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECAP1Q8NC96 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECAP1Q8NC96 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECAP1Q8NC96 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECAP1Q8NC96 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.06■□□□□ 0.96
NECAP1Q8NC96 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECAP1Q8NC96 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECAP1Q8NC96 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
NECAP1Q8NC96 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NECAP1Q8NC96 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECAP1Q8NC96 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECAP1Q8NC96 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
NECAP1Q8NC96 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NECAP1Q8NC96 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NECAP1Q8NC96 AC097358.2-201ENST00000607541 1159 ntBASIC21.01■□□□□ 0.95
NECAP1Q8NC96 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECAP1Q8NC96 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NECAP1Q8NC96 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NECAP1Q8NC96 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21■□□□□ 0.95
NECAP1Q8NC96 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21■□□□□ 0.95
NECAP1Q8NC96 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
NECAP1Q8NC96 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.99■□□□□ 0.95
NECAP1Q8NC96 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NECAP1Q8NC96 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NECAP1Q8NC96 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
NECAP1Q8NC96 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NECAP1Q8NC96 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.98■□□□□ 0.95
NECAP1Q8NC96 AC135731.1-201ENST00000569415 2548 ntBASIC20.98■□□□□ 0.95
NECAP1Q8NC96 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECAP1Q8NC96 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NECAP1Q8NC96 AC136428.2-201ENST00000563187 214 ntBASIC20.97■□□□□ 0.95
NECAP1Q8NC96 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NECAP1Q8NC96 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NECAP1Q8NC96 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NECAP1Q8NC96 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NECAP1Q8NC96 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms