Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNEP1R1Q8N9A8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNEP1R1Q8N9A8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.72■■□□□ 1.39
CNEP1R1Q8N9A8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNEP1R1Q8N9A8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.71■■□□□ 1.39
CNEP1R1Q8N9A8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.71■■□□□ 1.39
CNEP1R1Q8N9A8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.71■■□□□ 1.39
CNEP1R1Q8N9A8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CNEP1R1Q8N9A8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CNEP1R1Q8N9A8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CNEP1R1Q8N9A8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CNEP1R1Q8N9A8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CNEP1R1Q8N9A8 ABHD17AP4-201ENST00000411545 909 ntBASIC23.69■■□□□ 1.38
CNEP1R1Q8N9A8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CNEP1R1Q8N9A8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.68■■□□□ 1.38
CNEP1R1Q8N9A8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNEP1R1Q8N9A8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNEP1R1Q8N9A8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNEP1R1Q8N9A8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.65■■□□□ 1.38
CNEP1R1Q8N9A8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.65■■□□□ 1.38
CNEP1R1Q8N9A8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.65■■□□□ 1.38
CNEP1R1Q8N9A8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNEP1R1Q8N9A8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNEP1R1Q8N9A8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNEP1R1Q8N9A8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNEP1R1Q8N9A8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.63■■□□□ 1.37
CNEP1R1Q8N9A8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNEP1R1Q8N9A8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CNEP1R1Q8N9A8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.61■■□□□ 1.37
CNEP1R1Q8N9A8 AL161658.1-201ENST00000623641 1967 ntBASIC23.61■■□□□ 1.37
CNEP1R1Q8N9A8 AC108673.1-201ENST00000510422 1159 ntBASIC23.6■■□□□ 1.37
CNEP1R1Q8N9A8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.6■■□□□ 1.37
CNEP1R1Q8N9A8 MIR7108-201ENST00000614319 87 ntBASIC23.6■■□□□ 1.37
CNEP1R1Q8N9A8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNEP1R1Q8N9A8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNEP1R1Q8N9A8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNEP1R1Q8N9A8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNEP1R1Q8N9A8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNEP1R1Q8N9A8 DUX4L29-201ENST00000425409 679 ntBASIC23.57■■□□□ 1.36
CNEP1R1Q8N9A8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNEP1R1Q8N9A8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNEP1R1Q8N9A8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
CNEP1R1Q8N9A8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.56■■□□□ 1.36
CNEP1R1Q8N9A8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CNEP1R1Q8N9A8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CNEP1R1Q8N9A8 MIR6090-201ENST00000622481 60 ntBASIC23.54■■□□□ 1.36
CNEP1R1Q8N9A8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNEP1R1Q8N9A8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNEP1R1Q8N9A8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.53■■□□□ 1.36
CNEP1R1Q8N9A8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.53■■□□□ 1.36
CNEP1R1Q8N9A8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CNEP1R1Q8N9A8 ZNRF2P2-203ENST00000454624 420 ntBASIC23.51■■□□□ 1.35
CNEP1R1Q8N9A8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CNEP1R1Q8N9A8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.5■■□□□ 1.35
CNEP1R1Q8N9A8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.5■■□□□ 1.35
CNEP1R1Q8N9A8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CNEP1R1Q8N9A8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNEP1R1Q8N9A8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNEP1R1Q8N9A8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.49■■□□□ 1.35
CNEP1R1Q8N9A8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNEP1R1Q8N9A8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNEP1R1Q8N9A8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNEP1R1Q8N9A8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 AC021231.2-201ENST00000594613 730 ntBASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNEP1R1Q8N9A8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CNEP1R1Q8N9A8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.47■■□□□ 1.35
CNEP1R1Q8N9A8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CNEP1R1Q8N9A8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CNEP1R1Q8N9A8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNEP1R1Q8N9A8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CNEP1R1Q8N9A8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNEP1R1Q8N9A8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CNEP1R1Q8N9A8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CNEP1R1Q8N9A8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNEP1R1Q8N9A8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNEP1R1Q8N9A8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNEP1R1Q8N9A8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.44■■□□□ 1.34
CNEP1R1Q8N9A8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNEP1R1Q8N9A8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.44■■□□□ 1.34
CNEP1R1Q8N9A8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNEP1R1Q8N9A8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNEP1R1Q8N9A8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNEP1R1Q8N9A8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms