Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TTC9BQ8N6N2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.35■■■□□ 2.13
TTC9BQ8N6N2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
TTC9BQ8N6N2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TTC9BQ8N6N2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TTC9BQ8N6N2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.34■■■□□ 2.13
TTC9BQ8N6N2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.34■■■□□ 2.13
TTC9BQ8N6N2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TTC9BQ8N6N2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TTC9BQ8N6N2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.3■■■□□ 2.12
TTC9BQ8N6N2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TTC9BQ8N6N2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TTC9BQ8N6N2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.3■■■□□ 2.12
TTC9BQ8N6N2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.3■■■□□ 2.12
TTC9BQ8N6N2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TTC9BQ8N6N2 MIR7108-201ENST00000614319 87 ntBASIC28.28■■■□□ 2.12
TTC9BQ8N6N2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TTC9BQ8N6N2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.27■■■□□ 2.12
TTC9BQ8N6N2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.27■■■□□ 2.12
TTC9BQ8N6N2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TTC9BQ8N6N2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
TTC9BQ8N6N2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
TTC9BQ8N6N2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TTC9BQ8N6N2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
TTC9BQ8N6N2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TTC9BQ8N6N2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TTC9BQ8N6N2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TTC9BQ8N6N2 MIR6090-201ENST00000622481 60 ntBASIC28.23■■■□□ 2.11
TTC9BQ8N6N2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC9BQ8N6N2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC9BQ8N6N2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TTC9BQ8N6N2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.2■■■□□ 2.1
TTC9BQ8N6N2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TTC9BQ8N6N2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.18■■■□□ 2.1
TTC9BQ8N6N2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.18■■■□□ 2.1
TTC9BQ8N6N2 AL161658.1-201ENST00000623641 1967 ntBASIC28.17■■■□□ 2.1
TTC9BQ8N6N2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TTC9BQ8N6N2 ZNRF2P2-203ENST00000454624 420 ntBASIC28.17■■■□□ 2.1
TTC9BQ8N6N2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC9BQ8N6N2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TTC9BQ8N6N2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TTC9BQ8N6N2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TTC9BQ8N6N2 DUX4L29-201ENST00000425409 679 ntBASIC28.13■■■□□ 2.09
TTC9BQ8N6N2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.13■■■□□ 2.09
TTC9BQ8N6N2 AC021231.2-201ENST00000594613 730 ntBASIC28.13■■■□□ 2.09
TTC9BQ8N6N2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 AC108673.1-201ENST00000510422 1159 ntBASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC9BQ8N6N2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.11■■■□□ 2.09
TTC9BQ8N6N2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
TTC9BQ8N6N2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.11■■■□□ 2.09
TTC9BQ8N6N2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TTC9BQ8N6N2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
TTC9BQ8N6N2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC9BQ8N6N2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC9BQ8N6N2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC9BQ8N6N2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TTC9BQ8N6N2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TTC9BQ8N6N2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.08■■■□□ 2.09
TTC9BQ8N6N2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.08■■■□□ 2.09
TTC9BQ8N6N2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TTC9BQ8N6N2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TTC9BQ8N6N2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC9BQ8N6N2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.07■■■□□ 2.08
TTC9BQ8N6N2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TTC9BQ8N6N2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.07■■■□□ 2.08
TTC9BQ8N6N2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TTC9BQ8N6N2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TTC9BQ8N6N2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TTC9BQ8N6N2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TTC9BQ8N6N2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TTC9BQ8N6N2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TTC9BQ8N6N2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
TTC9BQ8N6N2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.04■■■□□ 2.08
TTC9BQ8N6N2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.04■■■□□ 2.08
TTC9BQ8N6N2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.03■■■□□ 2.08
TTC9BQ8N6N2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
TTC9BQ8N6N2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
TTC9BQ8N6N2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TTC9BQ8N6N2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TTC9BQ8N6N2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TTC9BQ8N6N2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TTC9BQ8N6N2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.01■■■□□ 2.07
TTC9BQ8N6N2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC9BQ8N6N2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC9BQ8N6N2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28■■■□□ 2.07
TTC9BQ8N6N2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TTC9BQ8N6N2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TTC9BQ8N6N2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.97■■■□□ 2.07
TTC9BQ8N6N2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
TTC9BQ8N6N2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
TTC9BQ8N6N2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TTC9BQ8N6N2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
TTC9BQ8N6N2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.95■■■□□ 2.06
TTC9BQ8N6N2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.95■■■□□ 2.06
TTC9BQ8N6N2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms