Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.9■■□□□ 1.74
RAB42Q8N4Z0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAB42Q8N4Z0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.9■■□□□ 1.74
RAB42Q8N4Z0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RAB42Q8N4Z0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RAB42Q8N4Z0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAB42Q8N4Z0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAB42Q8N4Z0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RAB42Q8N4Z0 AP006261.1-201ENST00000584783 668 ntBASIC25.89■■□□□ 1.74
RAB42Q8N4Z0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RAB42Q8N4Z0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.87■■□□□ 1.73
RAB42Q8N4Z0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAB42Q8N4Z0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RAB42Q8N4Z0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAB42Q8N4Z0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAB42Q8N4Z0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 AC005559.1-201ENST00000589661 871 ntBASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAB42Q8N4Z0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.84■■□□□ 1.73
RAB42Q8N4Z0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAB42Q8N4Z0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAB42Q8N4Z0 MIR3665-201ENST00000578708 105 ntBASIC25.83■■□□□ 1.73
RAB42Q8N4Z0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAB42Q8N4Z0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.82■■□□□ 1.72
RAB42Q8N4Z0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
RAB42Q8N4Z0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.81■■□□□ 1.72
RAB42Q8N4Z0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RAB42Q8N4Z0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.79■■□□□ 1.72
RAB42Q8N4Z0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAB42Q8N4Z0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
RAB42Q8N4Z0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RAB42Q8N4Z0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RAB42Q8N4Z0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.77■■□□□ 1.72
RAB42Q8N4Z0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
RAB42Q8N4Z0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.75■■□□□ 1.71
RAB42Q8N4Z0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.75■■□□□ 1.71
RAB42Q8N4Z0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RAB42Q8N4Z0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.75■■□□□ 1.71
RAB42Q8N4Z0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
RAB42Q8N4Z0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAB42Q8N4Z0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAB42Q8N4Z0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAB42Q8N4Z0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RAB42Q8N4Z0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RAB42Q8N4Z0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RAB42Q8N4Z0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.72■■□□□ 1.71
RAB42Q8N4Z0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.71■■□□□ 1.71
RAB42Q8N4Z0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.7■■□□□ 1.7
RAB42Q8N4Z0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RAB42Q8N4Z0 DUX4L28-201ENST00000623687 678 ntBASIC25.7■■□□□ 1.7
RAB42Q8N4Z0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RAB42Q8N4Z0 AL162393.1-201ENST00000437852 946 ntBASIC25.69■■□□□ 1.7
RAB42Q8N4Z0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
RAB42Q8N4Z0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RAB42Q8N4Z0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAB42Q8N4Z0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAB42Q8N4Z0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
RAB42Q8N4Z0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAB42Q8N4Z0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RAB42Q8N4Z0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.66■■□□□ 1.7
RAB42Q8N4Z0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RAB42Q8N4Z0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RAB42Q8N4Z0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RAB42Q8N4Z0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.64■■□□□ 1.7
RAB42Q8N4Z0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RAB42Q8N4Z0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
RAB42Q8N4Z0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAB42Q8N4Z0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.63■■□□□ 1.69
RAB42Q8N4Z0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RAB42Q8N4Z0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAB42Q8N4Z0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.62■■□□□ 1.69
RAB42Q8N4Z0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAB42Q8N4Z0 AL135925.1-201ENST00000605920 1701 ntBASIC25.61■■□□□ 1.69
RAB42Q8N4Z0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAB42Q8N4Z0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RAB42Q8N4Z0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAB42Q8N4Z0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAB42Q8N4Z0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAB42Q8N4Z0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAB42Q8N4Z0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.58■■□□□ 1.69
RAB42Q8N4Z0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.58■■□□□ 1.69
RAB42Q8N4Z0 AC044849.2-201ENST00000606596 710 ntBASIC25.58■■□□□ 1.69
RAB42Q8N4Z0 AC087741.3-201ENST00000624270 1347 ntBASIC25.58■■□□□ 1.69
RAB42Q8N4Z0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RAB42Q8N4Z0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RAB42Q8N4Z0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms