Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.29■■■□□ 2.6
RAB11FIP4Q86YS3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
RAB11FIP4Q86YS3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RAB11FIP4Q86YS3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RAB11FIP4Q86YS3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP4Q86YS3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP4Q86YS3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP4Q86YS3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.27■■■□□ 2.6
RAB11FIP4Q86YS3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP4Q86YS3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.26■■■□□ 2.6
RAB11FIP4Q86YS3 ABCB10P1-201ENST00000614297 2181 ntBASIC31.25■■■□□ 2.59
RAB11FIP4Q86YS3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RAB11FIP4Q86YS3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.24■■■□□ 2.59
RAB11FIP4Q86YS3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAB11FIP4Q86YS3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAB11FIP4Q86YS3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RAB11FIP4Q86YS3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAB11FIP4Q86YS3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAB11FIP4Q86YS3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.21■■■□□ 2.59
RAB11FIP4Q86YS3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
RAB11FIP4Q86YS3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAB11FIP4Q86YS3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAB11FIP4Q86YS3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.18■■■□□ 2.58
RAB11FIP4Q86YS3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAB11FIP4Q86YS3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
RAB11FIP4Q86YS3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAB11FIP4Q86YS3 MIR762-201ENST00000390236 83 ntBASIC31.17■■■□□ 2.58
RAB11FIP4Q86YS3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAB11FIP4Q86YS3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RAB11FIP4Q86YS3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB11FIP4Q86YS3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB11FIP4Q86YS3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAB11FIP4Q86YS3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RAB11FIP4Q86YS3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.14■■■□□ 2.58
RAB11FIP4Q86YS3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAB11FIP4Q86YS3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAB11FIP4Q86YS3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RAB11FIP4Q86YS3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RAB11FIP4Q86YS3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RAB11FIP4Q86YS3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
RAB11FIP4Q86YS3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.12■■■□□ 2.57
RAB11FIP4Q86YS3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
RAB11FIP4Q86YS3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAB11FIP4Q86YS3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAB11FIP4Q86YS3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAB11FIP4Q86YS3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAB11FIP4Q86YS3 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.09■■■□□ 2.57
RAB11FIP4Q86YS3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RAB11FIP4Q86YS3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RAB11FIP4Q86YS3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
RAB11FIP4Q86YS3 AL135925.1-201ENST00000605920 1701 ntBASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RAB11FIP4Q86YS3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RAB11FIP4Q86YS3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
RAB11FIP4Q86YS3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RAB11FIP4Q86YS3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
RAB11FIP4Q86YS3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
RAB11FIP4Q86YS3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.02■■■□□ 2.56
RAB11FIP4Q86YS3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
RAB11FIP4Q86YS3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RAB11FIP4Q86YS3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RAB11FIP4Q86YS3 ST7-AS1-201ENST00000456775 1889 ntBASIC31.01■■■□□ 2.55
RAB11FIP4Q86YS3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31■■■□□ 2.55
RAB11FIP4Q86YS3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.99■■■□□ 2.55
RAB11FIP4Q86YS3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RAB11FIP4Q86YS3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.99■■■□□ 2.55
RAB11FIP4Q86YS3 DUX4L28-201ENST00000623687 678 ntBASIC30.99■■■□□ 2.55
RAB11FIP4Q86YS3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAB11FIP4Q86YS3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
RAB11FIP4Q86YS3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.97■■■□□ 2.55
RAB11FIP4Q86YS3 AC005559.1-201ENST00000589661 871 ntBASIC30.97■■■□□ 2.55
RAB11FIP4Q86YS3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.97■■■□□ 2.55
RAB11FIP4Q86YS3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.96■■■□□ 2.55
RAB11FIP4Q86YS3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RAB11FIP4Q86YS3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
RAB11FIP4Q86YS3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.95■■■□□ 2.55
RAB11FIP4Q86YS3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RAB11FIP4Q86YS3 AL162393.1-201ENST00000437852 946 ntBASIC30.94■■■□□ 2.54
RAB11FIP4Q86YS3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.94■■■□□ 2.54
RAB11FIP4Q86YS3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RAB11FIP4Q86YS3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RAB11FIP4Q86YS3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RAB11FIP4Q86YS3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAB11FIP4Q86YS3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAB11FIP4Q86YS3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RAB11FIP4Q86YS3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.91■■■□□ 2.54
RAB11FIP4Q86YS3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAB11FIP4Q86YS3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAB11FIP4Q86YS3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAB11FIP4Q86YS3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RAB11FIP4Q86YS3 AC010864.1-201ENST00000609407 1511 ntBASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms