Protein–RNA interactions for Protein: Q5TA31

RNF187, E3 ubiquitin-protein ligase RNF187, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF187Q5TA31 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF187Q5TA31 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF187Q5TA31 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.28■■□□□ 1.96
RNF187Q5TA31 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF187Q5TA31 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RNF187Q5TA31 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF187Q5TA31 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF187Q5TA31 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.27■■□□□ 1.96
RNF187Q5TA31 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF187Q5TA31 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RNF187Q5TA31 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF187Q5TA31 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RNF187Q5TA31 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.24■■□□□ 1.95
RNF187Q5TA31 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF187Q5TA31 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
RNF187Q5TA31 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF187Q5TA31 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF187Q5TA31 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF187Q5TA31 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RNF187Q5TA31 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RNF187Q5TA31 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RNF187Q5TA31 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF187Q5TA31 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF187Q5TA31 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RNF187Q5TA31 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF187Q5TA31 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF187Q5TA31 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RNF187Q5TA31 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF187Q5TA31 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
RNF187Q5TA31 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
RNF187Q5TA31 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF187Q5TA31 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF187Q5TA31 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF187Q5TA31 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF187Q5TA31 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF187Q5TA31 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF187Q5TA31 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF187Q5TA31 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF187Q5TA31 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.16■■□□□ 1.94
RNF187Q5TA31 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
RNF187Q5TA31 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.15■■□□□ 1.94
RNF187Q5TA31 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
RNF187Q5TA31 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.13■■□□□ 1.93
RNF187Q5TA31 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RNF187Q5TA31 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RNF187Q5TA31 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
RNF187Q5TA31 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF187Q5TA31 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.1■■□□□ 1.93
RNF187Q5TA31 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RNF187Q5TA31 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF187Q5TA31 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF187Q5TA31 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.08■■□□□ 1.93
RNF187Q5TA31 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.92
RNF187Q5TA31 AC135731.1-201ENST00000569415 2548 ntBASIC27.06■■□□□ 1.92
RNF187Q5TA31 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.05■■□□□ 1.92
RNF187Q5TA31 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF187Q5TA31 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RNF187Q5TA31 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RNF187Q5TA31 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.01■■□□□ 1.91
RNF187Q5TA31 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.01■■□□□ 1.91
RNF187Q5TA31 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RNF187Q5TA31 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RNF187Q5TA31 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27■■□□□ 1.91
RNF187Q5TA31 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27■■□□□ 1.91
RNF187Q5TA31 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
RNF187Q5TA31 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF187Q5TA31 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.99■■□□□ 1.91
RNF187Q5TA31 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF187Q5TA31 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
RNF187Q5TA31 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RNF187Q5TA31 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF187Q5TA31 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RNF187Q5TA31 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
RNF187Q5TA31 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF187Q5TA31 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
RNF187Q5TA31 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF187Q5TA31 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF187Q5TA31 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.94■■□□□ 1.9
RNF187Q5TA31 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF187Q5TA31 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RNF187Q5TA31 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF187Q5TA31 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF187Q5TA31 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF187Q5TA31 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF187Q5TA31 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF187Q5TA31 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.9■■□□□ 1.9
RNF187Q5TA31 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.9■■□□□ 1.9
RNF187Q5TA31 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
RNF187Q5TA31 AL133380.1-201ENST00000506013 324 ntBASIC26.89■■□□□ 1.9
RNF187Q5TA31 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF187Q5TA31 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF187Q5TA31 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF187Q5TA31 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.88■■□□□ 1.89
RNF187Q5TA31 RARRES2P7-201ENST00000567349 469 ntBASIC26.88■■□□□ 1.89
RNF187Q5TA31 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF187Q5TA31 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RNF187Q5TA31 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
RNF187Q5TA31 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF187Q5TA31 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF187Q5TA31 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms