Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC39.13■■■■□ 3.85
CLTCL1P53675 MBP-237ENST00000579129 1052 ntTSL 5 BASIC39.11■■■■□ 3.85
CLTCL1P53675 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC39.1■■■■□ 3.85
CLTCL1P53675 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC39.1■■■■□ 3.85
CLTCL1P53675 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.09■■■■□ 3.85
CLTCL1P53675 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
CLTCL1P53675 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC39.09■■■■□ 3.85
CLTCL1P53675 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
CLTCL1P53675 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
CLTCL1P53675 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
CLTCL1P53675 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.07■■■■□ 3.84
CLTCL1P53675 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.07■■■■□ 3.84
CLTCL1P53675 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
CLTCL1P53675 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
CLTCL1P53675 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CLTCL1P53675 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CLTCL1P53675 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
CLTCL1P53675 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC39.04■■■■□ 3.84
CLTCL1P53675 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
CLTCL1P53675 MIR6090-201ENST00000622481 60 ntBASIC39.03■■■■□ 3.84
CLTCL1P53675 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.02■■■■□ 3.84
CLTCL1P53675 DUX4L29-201ENST00000425409 679 ntBASIC39.01■■■■□ 3.84
CLTCL1P53675 AC021231.2-201ENST00000594613 730 ntBASIC39.01■■■■□ 3.84
CLTCL1P53675 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CLTCL1P53675 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.98■■■■□ 3.83
CLTCL1P53675 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.98■■■■□ 3.83
CLTCL1P53675 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CLTCL1P53675 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC38.98■■■■□ 3.83
CLTCL1P53675 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
CLTCL1P53675 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC38.96■■■■□ 3.83
CLTCL1P53675 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC38.93■■■■□ 3.82
CLTCL1P53675 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.93■■■■□ 3.82
CLTCL1P53675 AC108673.1-201ENST00000510422 1159 ntBASIC38.93■■■■□ 3.82
CLTCL1P53675 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CLTCL1P53675 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC38.92■■■■□ 3.82
CLTCL1P53675 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC38.92■■■■□ 3.82
CLTCL1P53675 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
CLTCL1P53675 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.92■■■■□ 3.82
CLTCL1P53675 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC38.91■■■■□ 3.82
CLTCL1P53675 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC38.89■■■■□ 3.82
CLTCL1P53675 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC38.89■■■■□ 3.82
CLTCL1P53675 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
CLTCL1P53675 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
CLTCL1P53675 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC38.87■■■■□ 3.81
CLTCL1P53675 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC38.87■■■■□ 3.81
CLTCL1P53675 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC38.87■■■■□ 3.81
CLTCL1P53675 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CLTCL1P53675 CIB2-204ENST00000557846 934 ntTSL 3 BASIC38.86■■■■□ 3.81
CLTCL1P53675 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC38.86■■■■□ 3.81
CLTCL1P53675 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
CLTCL1P53675 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC38.83■■■■□ 3.81
CLTCL1P53675 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
CLTCL1P53675 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
CLTCL1P53675 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.82■■■■□ 3.81
CLTCL1P53675 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.82■■■■□ 3.81
CLTCL1P53675 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.82■■■■□ 3.81
CLTCL1P53675 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CLTCL1P53675 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC38.8■■■■□ 3.8
CLTCL1P53675 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC38.79■■■■□ 3.8
CLTCL1P53675 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.79■■■■□ 3.8
CLTCL1P53675 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC38.74■■■■□ 3.79
CLTCL1P53675 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CLTCL1P53675 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CLTCL1P53675 CR559946.2-201ENST00000623684 991 ntBASIC38.73■■■■□ 3.79
CLTCL1P53675 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.72■■■■□ 3.79
CLTCL1P53675 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
CLTCL1P53675 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC38.71■■■■□ 3.79
CLTCL1P53675 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CLTCL1P53675 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC38.68■■■■□ 3.78
CLTCL1P53675 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
CLTCL1P53675 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
CLTCL1P53675 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC38.67■■■■□ 3.78
CLTCL1P53675 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC38.66■■■■□ 3.78
CLTCL1P53675 MIR4449-201ENST00000578365 66 ntBASIC38.66■■■■□ 3.78
CLTCL1P53675 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CLTCL1P53675 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.65■■■■□ 3.78
CLTCL1P53675 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
CLTCL1P53675 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.63■■■■□ 3.78
CLTCL1P53675 LINC01971-201ENST00000617888 1048 ntBASIC38.63■■■■□ 3.77
CLTCL1P53675 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC38.61■■■■□ 3.77
CLTCL1P53675 MIR3648-2-201ENST00000581792 180 ntBASIC38.61■■■■□ 3.77
CLTCL1P53675 AC016575.1-201ENST00000607026 382 ntBASIC38.61■■■■□ 3.77
CLTCL1P53675 MIR3648-1-201ENST00000615959 180 ntBASIC38.61■■■■□ 3.77
CLTCL1P53675 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
CLTCL1P53675 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CLTCL1P53675 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC38.6■■■■□ 3.77
CLTCL1P53675 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC38.6■■■■□ 3.77
CLTCL1P53675 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.59■■■■□ 3.77
CLTCL1P53675 MIR639-201ENST00000384974 98 ntBASIC38.59■■■■□ 3.77
CLTCL1P53675 DUX4L11-201ENST00000611504 1267 ntBASIC38.59■■■■□ 3.77
CLTCL1P53675 DUX4L12-201ENST00000614593 1267 ntBASIC38.59■■■■□ 3.77
CLTCL1P53675 DUX4L14-201ENST00000621227 1267 ntBASIC38.59■■■■□ 3.77
CLTCL1P53675 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
CLTCL1P53675 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
CLTCL1P53675 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
CLTCL1P53675 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.55■■■■□ 3.76
CLTCL1P53675 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.54■■■■□ 3.76
CLTCL1P53675 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
CLTCL1P53675 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
CLTCL1P53675 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.53■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms