Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.31■■□□□ 1
NDUFA3O95167 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.31■■□□□ 1
NDUFA3O95167 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NDUFA3O95167 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.3■■□□□ 1
NDUFA3O95167 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFA3O95167 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.29■■□□□ 1
NDUFA3O95167 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.28■■□□□ 1
NDUFA3O95167 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA3O95167 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.28■■□□□ 1
NDUFA3O95167 SUZ12P1-203ENST00000578195 985 ntBASIC21.28■■□□□ 1
NDUFA3O95167 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA3O95167 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA3O95167 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA3O95167 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA3O95167 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.26■□□□□ 0.99
NDUFA3O95167 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NDUFA3O95167 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA3O95167 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA3O95167 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NDUFA3O95167 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFA3O95167 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFA3O95167 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NDUFA3O95167 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NDUFA3O95167 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFA3O95167 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NDUFA3O95167 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFA3O95167 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NDUFA3O95167 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NDUFA3O95167 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA3O95167 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA3O95167 AL135925.1-201ENST00000605920 1701 ntBASIC21.18■□□□□ 0.98
NDUFA3O95167 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFA3O95167 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFA3O95167 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NDUFA3O95167 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.17■□□□□ 0.98
NDUFA3O95167 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NDUFA3O95167 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NDUFA3O95167 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.16■□□□□ 0.98
NDUFA3O95167 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFA3O95167 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFA3O95167 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.16■□□□□ 0.98
NDUFA3O95167 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFA3O95167 ST7-AS1-201ENST00000456775 1889 ntBASIC21.14■□□□□ 0.97
NDUFA3O95167 MIR762-201ENST00000390236 83 ntBASIC21.14■□□□□ 0.97
NDUFA3O95167 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFA3O95167 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.13■□□□□ 0.97
NDUFA3O95167 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFA3O95167 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.13■□□□□ 0.97
NDUFA3O95167 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.13■□□□□ 0.97
NDUFA3O95167 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.12■□□□□ 0.97
NDUFA3O95167 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA3O95167 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NDUFA3O95167 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA3O95167 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NDUFA3O95167 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NDUFA3O95167 ABCB10P1-201ENST00000614297 2181 ntBASIC21.1■□□□□ 0.97
NDUFA3O95167 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFA3O95167 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFA3O95167 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFA3O95167 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NDUFA3O95167 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.09■□□□□ 0.97
NDUFA3O95167 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.09■□□□□ 0.97
NDUFA3O95167 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.09■□□□□ 0.97
NDUFA3O95167 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFA3O95167 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
NDUFA3O95167 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NDUFA3O95167 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFA3O95167 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFA3O95167 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.07■□□□□ 0.96
NDUFA3O95167 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA3O95167 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA3O95167 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA3O95167 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA3O95167 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA3O95167 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA3O95167 AC010864.1-201ENST00000609407 1511 ntBASIC21.05■□□□□ 0.96
NDUFA3O95167 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA3O95167 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA3O95167 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA3O95167 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA3O95167 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFA3O95167 AC005559.1-201ENST00000589661 871 ntBASIC21.03■□□□□ 0.96
NDUFA3O95167 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFA3O95167 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
NDUFA3O95167 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFA3O95167 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NDUFA3O95167 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFA3O95167 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFA3O95167 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NDUFA3O95167 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFA3O95167 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFA3O95167 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFA3O95167 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFA3O95167 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFA3O95167 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms