Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.11■■□□□ 1.77
PPM1DO15297 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.1■■□□□ 1.77
PPM1DO15297 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPM1DO15297 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPM1DO15297 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPM1DO15297 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.09■■□□□ 1.77
PPM1DO15297 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.09■■□□□ 1.77
PPM1DO15297 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PPM1DO15297 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPM1DO15297 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.06■■□□□ 1.76
PPM1DO15297 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PPM1DO15297 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PPM1DO15297 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPM1DO15297 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.05■■□□□ 1.76
PPM1DO15297 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPM1DO15297 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
PPM1DO15297 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
PPM1DO15297 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPM1DO15297 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPM1DO15297 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PPM1DO15297 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.03■■□□□ 1.76
PPM1DO15297 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPM1DO15297 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPM1DO15297 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPM1DO15297 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.02■■□□□ 1.76
PPM1DO15297 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPM1DO15297 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPM1DO15297 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PPM1DO15297 MIR7108-201ENST00000614319 87 ntBASIC26.01■■□□□ 1.75
PPM1DO15297 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPM1DO15297 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PPM1DO15297 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PPM1DO15297 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.99■■□□□ 1.75
PPM1DO15297 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPM1DO15297 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.98■■□□□ 1.75
PPM1DO15297 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.98■■□□□ 1.75
PPM1DO15297 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.98■■□□□ 1.75
PPM1DO15297 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PPM1DO15297 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.97■■□□□ 1.75
PPM1DO15297 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPM1DO15297 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PPM1DO15297 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PPM1DO15297 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.95■■□□□ 1.74
PPM1DO15297 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.94■■□□□ 1.74
PPM1DO15297 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPM1DO15297 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.94■■□□□ 1.74
PPM1DO15297 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PPM1DO15297 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PPM1DO15297 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.93■■□□□ 1.74
PPM1DO15297 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PPM1DO15297 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPM1DO15297 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.92■■□□□ 1.74
PPM1DO15297 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PPM1DO15297 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPM1DO15297 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PPM1DO15297 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PPM1DO15297 ZNRF2P2-203ENST00000454624 420 ntBASIC25.91■■□□□ 1.74
PPM1DO15297 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PPM1DO15297 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPM1DO15297 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PPM1DO15297 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.89■■□□□ 1.74
PPM1DO15297 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.89■■□□□ 1.74
PPM1DO15297 MIR6090-201ENST00000622481 60 ntBASIC25.89■■□□□ 1.74
PPM1DO15297 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.89■■□□□ 1.73
PPM1DO15297 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PPM1DO15297 DUX4L29-201ENST00000425409 679 ntBASIC25.88■■□□□ 1.73
PPM1DO15297 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.88■■□□□ 1.73
PPM1DO15297 AC108673.1-201ENST00000510422 1159 ntBASIC25.87■■□□□ 1.73
PPM1DO15297 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.86■■□□□ 1.73
PPM1DO15297 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.86■■□□□ 1.73
PPM1DO15297 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPM1DO15297 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.86■■□□□ 1.73
PPM1DO15297 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PPM1DO15297 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPM1DO15297 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PPM1DO15297 AC021231.2-201ENST00000594613 730 ntBASIC25.83■■□□□ 1.73
PPM1DO15297 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PPM1DO15297 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPM1DO15297 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPM1DO15297 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.81■■□□□ 1.72
PPM1DO15297 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.81■■□□□ 1.72
PPM1DO15297 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPM1DO15297 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPM1DO15297 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPM1DO15297 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PPM1DO15297 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PPM1DO15297 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
PPM1DO15297 AL161658.1-201ENST00000623641 1967 ntBASIC25.8■■□□□ 1.72
PPM1DO15297 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPM1DO15297 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPM1DO15297 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.78■■□□□ 1.72
PPM1DO15297 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPM1DO15297 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.78■■□□□ 1.72
PPM1DO15297 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.78■■□□□ 1.72
PPM1DO15297 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PPM1DO15297 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PPM1DO15297 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.77■■□□□ 1.72
PPM1DO15297 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PPM1DO15297 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PPM1DO15297 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms