Protein–RNA interactions for Protein: D6RBQ6

USP17L17, Ubiquitin carboxyl-terminal hydrolase 17-like protein 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L17D6RBQ6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP17L17D6RBQ6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP17L17D6RBQ6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
USP17L17D6RBQ6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP17L17D6RBQ6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.32■■■□□ 2.6
USP17L17D6RBQ6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.32■■■□□ 2.6
USP17L17D6RBQ6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.32■■■□□ 2.6
USP17L17D6RBQ6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
USP17L17D6RBQ6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP17L17D6RBQ6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.29■■■□□ 2.6
USP17L17D6RBQ6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
USP17L17D6RBQ6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
USP17L17D6RBQ6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.27■■■□□ 2.6
USP17L17D6RBQ6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP17L17D6RBQ6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP17L17D6RBQ6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP17L17D6RBQ6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.26■■■□□ 2.59
USP17L17D6RBQ6 AC021231.2-201ENST00000594613 730 ntBASIC31.26■■■□□ 2.59
USP17L17D6RBQ6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
USP17L17D6RBQ6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP17L17D6RBQ6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
USP17L17D6RBQ6 AC108673.1-201ENST00000510422 1159 ntBASIC31.23■■■□□ 2.59
USP17L17D6RBQ6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.23■■■□□ 2.59
USP17L17D6RBQ6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
USP17L17D6RBQ6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
USP17L17D6RBQ6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP17L17D6RBQ6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
USP17L17D6RBQ6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.21■■■□□ 2.59
USP17L17D6RBQ6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
USP17L17D6RBQ6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
USP17L17D6RBQ6 MIR6090-201ENST00000622481 60 ntBASIC31.2■■■□□ 2.59
USP17L17D6RBQ6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
USP17L17D6RBQ6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
USP17L17D6RBQ6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP17L17D6RBQ6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
USP17L17D6RBQ6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.18■■■□□ 2.58
USP17L17D6RBQ6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.18■■■□□ 2.58
USP17L17D6RBQ6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP17L17D6RBQ6 AC120057.4-201ENST00000624722 1615 ntBASIC31.17■■■□□ 2.58
USP17L17D6RBQ6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.17■■■□□ 2.58
USP17L17D6RBQ6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
USP17L17D6RBQ6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP17L17D6RBQ6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP17L17D6RBQ6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
USP17L17D6RBQ6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.15■■■□□ 2.58
USP17L17D6RBQ6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.15■■■□□ 2.58
USP17L17D6RBQ6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP17L17D6RBQ6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP17L17D6RBQ6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
USP17L17D6RBQ6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.13■■■□□ 2.57
USP17L17D6RBQ6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
USP17L17D6RBQ6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP17L17D6RBQ6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
USP17L17D6RBQ6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP17L17D6RBQ6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.11■■■□□ 2.57
USP17L17D6RBQ6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.09■■■□□ 2.57
USP17L17D6RBQ6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP17L17D6RBQ6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP17L17D6RBQ6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP17L17D6RBQ6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.07■■■□□ 2.56
USP17L17D6RBQ6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP17L17D6RBQ6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP17L17D6RBQ6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.05■■■□□ 2.56
USP17L17D6RBQ6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP17L17D6RBQ6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP17L17D6RBQ6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP17L17D6RBQ6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
USP17L17D6RBQ6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31■■■□□ 2.55
USP17L17D6RBQ6 MIR639-201ENST00000384974 98 ntBASIC30.98■■■□□ 2.55
USP17L17D6RBQ6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.98■■■□□ 2.55
USP17L17D6RBQ6 MIR4449-201ENST00000578365 66 ntBASIC30.97■■■□□ 2.55
USP17L17D6RBQ6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
USP17L17D6RBQ6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.95■■■□□ 2.55
USP17L17D6RBQ6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
USP17L17D6RBQ6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
USP17L17D6RBQ6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
USP17L17D6RBQ6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
USP17L17D6RBQ6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 MIR3648-2-201ENST00000581792 180 ntBASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 MIR3648-1-201ENST00000615959 180 ntBASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP17L17D6RBQ6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
USP17L17D6RBQ6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.93■■■□□ 2.54
USP17L17D6RBQ6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
USP17L17D6RBQ6 LINC01971-201ENST00000617888 1048 ntBASIC30.93■■■□□ 2.54
USP17L17D6RBQ6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.92■■■□□ 2.54
USP17L17D6RBQ6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.91■■■□□ 2.54
USP17L17D6RBQ6 DUX4L11-201ENST00000611504 1267 ntBASIC30.91■■■□□ 2.54
USP17L17D6RBQ6 DUX4L12-201ENST00000614593 1267 ntBASIC30.91■■■□□ 2.54
USP17L17D6RBQ6 DUX4L14-201ENST00000621227 1267 ntBASIC30.91■■■□□ 2.54
USP17L17D6RBQ6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
USP17L17D6RBQ6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP17L17D6RBQ6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP17L17D6RBQ6 AC016575.1-201ENST00000607026 382 ntBASIC30.9■■■□□ 2.54
USP17L17D6RBQ6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP17L17D6RBQ6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP17L17D6RBQ6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms