Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV5A0A0B4J249 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TRAV5A0A0B4J249 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAV5A0A0B4J249 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV5A0A0B4J249 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV5A0A0B4J249 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV5A0A0B4J249 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV5A0A0B4J249 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV5A0A0B4J249 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV5A0A0B4J249 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV5A0A0B4J249 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV5A0A0B4J249 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV5A0A0B4J249 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV5A0A0B4J249 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV5A0A0B4J249 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAV5A0A0B4J249 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRAV5A0A0B4J249 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV5A0A0B4J249 AL135925.1-201ENST00000605920 1701 ntBASIC20.61■□□□□ 0.89
TRAV5A0A0B4J249 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV5A0A0B4J249 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV5A0A0B4J249 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV5A0A0B4J249 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV5A0A0B4J249 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
TRAV5A0A0B4J249 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV5A0A0B4J249 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV5A0A0B4J249 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV5A0A0B4J249 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV5A0A0B4J249 AL031258.1-201ENST00000623562 325 ntBASIC20.59■□□□□ 0.89
TRAV5A0A0B4J249 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV5A0A0B4J249 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV5A0A0B4J249 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV5A0A0B4J249 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV5A0A0B4J249 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV5A0A0B4J249 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV5A0A0B4J249 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV5A0A0B4J249 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV5A0A0B4J249 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV5A0A0B4J249 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV5A0A0B4J249 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV5A0A0B4J249 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV5A0A0B4J249 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV5A0A0B4J249 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAV5A0A0B4J249 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV5A0A0B4J249 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV5A0A0B4J249 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV5A0A0B4J249 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV5A0A0B4J249 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV5A0A0B4J249 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV5A0A0B4J249 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV5A0A0B4J249 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRAV5A0A0B4J249 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV5A0A0B4J249 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV5A0A0B4J249 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV5A0A0B4J249 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV5A0A0B4J249 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV5A0A0B4J249 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV5A0A0B4J249 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV5A0A0B4J249 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV5A0A0B4J249 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV5A0A0B4J249 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV5A0A0B4J249 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV5A0A0B4J249 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV5A0A0B4J249 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV5A0A0B4J249 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV5A0A0B4J249 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV5A0A0B4J249 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV5A0A0B4J249 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV5A0A0B4J249 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV5A0A0B4J249 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRAV5A0A0B4J249 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV5A0A0B4J249 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV5A0A0B4J249 AC142086.6-201ENST00000621154 1765 ntBASIC20.46■□□□□ 0.87
TRAV5A0A0B4J249 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAV5A0A0B4J249 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAV5A0A0B4J249 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV5A0A0B4J249 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV5A0A0B4J249 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV5A0A0B4J249 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRAV5A0A0B4J249 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV5A0A0B4J249 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV5A0A0B4J249 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV5A0A0B4J249 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV5A0A0B4J249 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAV5A0A0B4J249 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV5A0A0B4J249 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAV5A0A0B4J249 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAV5A0A0B4J249 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 AL139393.2-201ENST00000608721 2025 ntBASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRAV5A0A0B4J249 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV5A0A0B4J249 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV5A0A0B4J249 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRAV5A0A0B4J249 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAV5A0A0B4J249 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAV5A0A0B4J249 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV5A0A0B4J249 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV5A0A0B4J249 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms