Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.12■□□□□ 0.97
HMGCLP35914 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HMGCLP35914 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.12■□□□□ 0.97
HMGCLP35914 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HMGCLP35914 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGCLP35914 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGCLP35914 AC004854.2-201ENST00000608450 1441 ntBASIC21.12■□□□□ 0.97
HMGCLP35914 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGCLP35914 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMGCLP35914 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCLP35914 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
HMGCLP35914 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
HMGCLP35914 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCLP35914 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCLP35914 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGCLP35914 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGCLP35914 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.11■□□□□ 0.97
HMGCLP35914 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGCLP35914 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HMGCLP35914 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HMGCLP35914 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HMGCLP35914 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGCLP35914 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGCLP35914 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGCLP35914 AC138907.5-202ENST00000569484 235 ntBASIC21.1■□□□□ 0.97
HMGCLP35914 NTF6G-201ENST00000591094 616 ntBASIC21.1■□□□□ 0.97
HMGCLP35914 AC104187.1-201ENST00000607510 612 ntBASIC21.1■□□□□ 0.97
HMGCLP35914 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HMGCLP35914 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGCLP35914 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGCLP35914 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
HMGCLP35914 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HMGCLP35914 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HMGCLP35914 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGCLP35914 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
HMGCLP35914 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGCLP35914 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.09■□□□□ 0.97
HMGCLP35914 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGCLP35914 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGCLP35914 KRT18P61-201ENST00000585825 1298 ntBASIC21.09■□□□□ 0.97
HMGCLP35914 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 Z98882.1-201ENST00000622160 2253 ntBASIC21.09■□□□□ 0.97
HMGCLP35914 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HMGCLP35914 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGCLP35914 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HMGCLP35914 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HMGCLP35914 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HMGCLP35914 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGCLP35914 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCLP35914 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCLP35914 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HMGCLP35914 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.08■□□□□ 0.97
HMGCLP35914 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.96
HMGCLP35914 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCLP35914 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HMGCLP35914 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.08■□□□□ 0.96
HMGCLP35914 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.07■□□□□ 0.96
HMGCLP35914 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.07■□□□□ 0.96
HMGCLP35914 KRT19P1-201ENST00000405746 1186 ntBASIC21.07■□□□□ 0.96
HMGCLP35914 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms