RNA–Protein interactions for RNA: ENST00000341355.9

RAP1B-202, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAP1B, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-202ENST00000341355 NISCHQ9Y2I1 1504 aa51.8■■■■■ 5.88
RAP1B-202ENST00000341355 CCDC180Q9P1Z9 1646 aa46.13■■■■■ 4.97
RAP1B-202ENST00000341355 ABCC9O60706 1549 aa45.21■■■■■ 4.83
RAP1B-202ENST00000341355 RB1CC1Q8TDY2 1594 aa43.52■■■■■ 4.56
RAP1B-202ENST00000341355 NACADO15069 1562 aa43.46■■■■■ 4.55
RAP1B-202ENST00000341355 DCAF8L2P0C7V8 631 aa43.28■■■■■ 4.52
RAP1B-202ENST00000341355 MYO15BQ96JP2 1530 aa43.23■■■■■ 4.51
RAP1B-202ENST00000341355 ZCCHC6Q5VYS8 1495 aaKnown RBP43.1■■■■■ 4.49
RAP1B-202ENST00000341355 DCAF1Q9Y4B6 1507 aa42.95■■■■■ 4.47
RAP1B-202ENST00000341355 UNC13AQ9UPW8 1703 aa42.38■■■■■ 4.38
RAP1B-202ENST00000341355 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
RAP1B-202ENST00000341355 BICRAQ9NZM4 1560 aa42.14■■■■■ 4.34
RAP1B-202ENST00000341355 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
RAP1B-202ENST00000341355 SHROOM4Q9ULL8 1493 aa41.87■■■■■ 4.29
RAP1B-202ENST00000341355 DNAJC5BQ9UF47 199 aa41.67■■■■■ 4.26
RAP1B-202ENST00000341355 EIF4G1Q04637 1599 aaKnown RBP41.07■■■■■ 4.16
RAP1B-202ENST00000341355 CC2D2AQ9P2K1 1620 aa40.92■■■■■ 4.14
RAP1B-202ENST00000341355 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
RAP1B-202ENST00000341355 SMARCA4P51532 1647 aa40.18■■■■■ 4.02
RAP1B-202ENST00000341355 BAZ1AQ9NRL2 1556 aaPredicted RBP40.18■■■■■ 4.02
RAP1B-202ENST00000341355 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
RAP1B-202ENST00000341355 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4
RAP1B-202ENST00000341355 SMARCA2P51531 1590 aa40.03■■■■■ 4
RAP1B-202ENST00000341355 PEG3Q9GZU2 1588 aa39.88■■■■□ 3.97
RAP1B-202ENST00000341355 HMGXB3Q12766 1538 aa39.87■■■■□ 3.97
RAP1B-202ENST00000341355 MROH2BQ7Z745 1585 aa39.85■■■■□ 3.97
RAP1B-202ENST00000341355 BAZ1BQ9UIG0 1483 aaKnown RBP39.7■■■■□ 3.95
RAP1B-202ENST00000341355 RSF1Q96T23 1441 aaPredicted RBP39.39■■■■□ 3.9
RAP1B-202ENST00000341355 WIZO95785 1651 aa39.37■■■■□ 3.89
RAP1B-202ENST00000341355 LAMC3Q9Y6N6 1575 aa39.06■■■■□ 3.84
RAP1B-202ENST00000341355 NESP48681 1621 aa39.04■■■■□ 3.84
RAP1B-202ENST00000341355 ERCC6Q03468 1493 aa39.03■■■■□ 3.84
RAP1B-202ENST00000341355 TOP2AP11388 1531 aaKnown RBP39.03■■■■□ 3.84
RAP1B-202ENST00000341355 CADPSQ9ULU8 1353 aa38.94■■■■□ 3.82
RAP1B-202ENST00000341355 PDS5BQ9NTI5 1447 aa38.84■■■■□ 3.81
RAP1B-202ENST00000341355 CUX2O14529 1486 aa38.77■■■■□ 3.8
RAP1B-202ENST00000341355 CFTRP13569 1480 aa38.65■■■■□ 3.78
RAP1B-202ENST00000341355 CCDC88BA6NC98 1476 aa38.57■■■■□ 3.76
RAP1B-202ENST00000341355 KIF21AQ7Z4S6 1674 aa38.56■■■■□ 3.76
RAP1B-202ENST00000341355 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
RAP1B-202ENST00000341355 FANCD2Q9BXW9 1451 aa38.42■■■■□ 3.74
RAP1B-202ENST00000341355 CEP164Q9UPV0 1460 aa38.4■■■■□ 3.74
RAP1B-202ENST00000341355 MRC2Q9UBG0 1479 aa38.39■■■■□ 3.74
RAP1B-202ENST00000341355 WDR62O43379 1518 aa38.27■■■■□ 3.72
RAP1B-202ENST00000341355 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
RAP1B-202ENST00000341355 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
RAP1B-202ENST00000341355 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
RAP1B-202ENST00000341355 ABCC8Q09428 1581 aa37.9■■■■□ 3.66
RAP1B-202ENST00000341355 TOPBP1Q92547 1522 aa37.78■■■■□ 3.64
RAP1B-202ENST00000341355 DNAJC5Q9H3Z4 198 aa37.78■■■■□ 3.64
RAP1B-202ENST00000341355 DNMBPQ6XZF7 1577 aa37.73■■■■□ 3.63
RAP1B-202ENST00000341355 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
RAP1B-202ENST00000341355 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
RAP1B-202ENST00000341355 CUX1P39880 1505 aa37.4■■■■□ 3.58
RAP1B-202ENST00000341355 ZNF608Q9ULD9 1512 aaPredicted RBP37.38■■■■□ 3.57
RAP1B-202ENST00000341355 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
RAP1B-202ENST00000341355 SOGA1O94964 1423 aa37.33■■■■□ 3.57
RAP1B-202ENST00000341355 FGD5Q6ZNL6 1462 aa37.31■■■■□ 3.56
RAP1B-202ENST00000341355 RAD54L2Q9Y4B4 1467 aa37.24■■■■□ 3.55
RAP1B-202ENST00000341355 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
RAP1B-202ENST00000341355 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
RAP1B-202ENST00000341355 AQRO60306 1485 aaKnown RBP eCLIP37.18■■■■□ 3.541e-6■■■■□ 26.1
RAP1B-202ENST00000341355 OSCARQ8IYS5 282 aa37.15■■■■□ 3.54
RAP1B-202ENST00000341355 WRNQ14191 1432 aaPredicted RBP eCLIP37.15■■■■□ 3.54
RAP1B-202ENST00000341355 TDRD9Q8NDG6 1382 aaKnown RBP37.09■■■■□ 3.53
RAP1B-202ENST00000341355 TOP2BQ02880 1626 aa37.07■■■■□ 3.53
RAP1B-202ENST00000341355 BIVM-ERCC5R4GMW8 1640 aa37.05■■■■□ 3.52
RAP1B-202ENST00000341355 ABCA10Q8WWZ4 1543 aa37.01■■■■□ 3.52
RAP1B-202ENST00000341355 SYNJ1O43426 1573 aa36.98■■■■□ 3.51
RAP1B-202ENST00000341355 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
RAP1B-202ENST00000341355 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
RAP1B-202ENST00000341355 MAGI1Q96QZ7 1491 aaPredicted RBP36.86■■■■□ 3.49
RAP1B-202ENST00000341355 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.49
RAP1B-202ENST00000341355 ABCA5Q8WWZ7 1642 aa36.81■■■■□ 3.48
RAP1B-202ENST00000341355 FBLN2P98095 1184 aa36.76■■■■□ 3.48
RAP1B-202ENST00000341355 CHD1O14646 1710 aa36.74■■■■□ 3.47
RAP1B-202ENST00000341355 PBRM1Q86U86 1689 aa36.72■■■■□ 3.47
RAP1B-202ENST00000341355 CHMP7Q8WUX9 453 aaPredicted RBP36.71■■■■□ 3.47
RAP1B-202ENST00000341355 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
RAP1B-202ENST00000341355 ERICH3Q5RHP9 1530 aa36.58■■■■□ 3.45
RAP1B-202ENST00000341355 FHAD1B1AJZ9 1412 aa36.49■■■■□ 3.43
RAP1B-202ENST00000341355 ADAMTS12P58397 1594 aa36.47■■■■□ 3.43
RAP1B-202ENST00000341355 ARHGEF11O15085 1522 aa36.44■■■■□ 3.42
RAP1B-202ENST00000341355 CLASP1Q7Z460 1538 aa36.44■■■■□ 3.42
RAP1B-202ENST00000341355 RIMBP3CA6NJZ7 1639 aa36.43■■■■□ 3.42
RAP1B-202ENST00000341355 RIMBP3BA6NNM3 1639 aa36.43■■■■□ 3.42
RAP1B-202ENST00000341355 RIMBP3Q9UFD9 1639 aa36.43■■■■□ 3.42
RAP1B-202ENST00000341355 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
RAP1B-202ENST00000341355 GRIN2AQ12879 1464 aa36.42■■■■□ 3.42
RAP1B-202ENST00000341355 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
RAP1B-202ENST00000341355 NUP160Q12769 1436 aa36.3■■■■□ 3.4
RAP1B-202ENST00000341355 IGF1RP08069 1367 aa36.29■■■■□ 3.4
RAP1B-202ENST00000341355 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
RAP1B-202ENST00000341355 CUL7Q14999 1698 aa36.17■■■■□ 3.38
RAP1B-202ENST00000341355 CYB5RLQ6IPT4 315 aa36.13■■■■□ 3.37
RAP1B-202ENST00000341355 ARAP1Q96P48 1450 aa36.12■■■■□ 3.37
RAP1B-202ENST00000341355 CARMIL1Q5VZK9 1371 aa36.07■■■■□ 3.36
RAP1B-202ENST00000341355 SHROOM2Q13796 1616 aa36■■■■□ 3.35
RAP1B-202ENST00000341355 JPH4Q96JJ6 628 aa35.95■■■■□ 3.35
RAP1B-202ENST00000341355 KIAA0586Q9BVV6 1533 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms