RNA–Protein interactions for RNA: ENST00000376438.5

FRMD3-204, Transcript of FERM domain containing 3, humanhuman

TSL 2 BASIC

Gene FRMD3, Length 2,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-204ENST00000376438 NISCHQ9Y2I1 1504 aa47.45■■■■■ 5.19
FRMD3-204ENST00000376438 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
FRMD3-204ENST00000376438 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.98
FRMD3-204ENST00000376438 DCAF8L2P0C7V8 631 aa39.43■■■■□ 3.9
FRMD3-204ENST00000376438 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
FRMD3-204ENST00000376438 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
FRMD3-204ENST00000376438 ABCC9O60706 1549 aa39.05■■■■□ 3.84
FRMD3-204ENST00000376438 MYO15BQ96JP2 1530 aa38.51■■■■□ 3.75
FRMD3-204ENST00000376438 NACADO15069 1562 aa38.32■■■■□ 3.72
FRMD3-204ENST00000376438 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
FRMD3-204ENST00000376438 RB1CC1Q8TDY2 1594 aa37.99■■■■□ 3.67
FRMD3-204ENST00000376438 SUPT5HO00267 1087 aaKnown RBP37.72■■■■□ 3.63
FRMD3-204ENST00000376438 UNC13AQ9UPW8 1703 aa37.34■■■■□ 3.57
FRMD3-204ENST00000376438 CECR2Q9BXF3 1484 aa37■■■■□ 3.51
FRMD3-204ENST00000376438 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
FRMD3-204ENST00000376438 RSF1Q96T23 1441 aaPredicted RBP36.94■■■■□ 3.5
FRMD3-204ENST00000376438 BICRAQ9NZM4 1560 aa36.93■■■■□ 3.5
FRMD3-204ENST00000376438 MROH2BQ7Z745 1585 aa36.76■■■■□ 3.47
FRMD3-204ENST00000376438 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
FRMD3-204ENST00000376438 WIZO95785 1651 aa36.49■■■■□ 3.43
FRMD3-204ENST00000376438 SMARCA4P51532 1647 aa36.45■■■■□ 3.42
FRMD3-204ENST00000376438 CHIC1Q5VXU3 224 aa36.09■■■■□ 3.37
FRMD3-204ENST00000376438 TOP2AP11388 1531 aaKnown RBP35.99■■■■□ 3.35
FRMD3-204ENST00000376438 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
FRMD3-204ENST00000376438 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
FRMD3-204ENST00000376438 EIF4G1Q04637 1599 aaKnown RBP35.8■■■■□ 3.32
FRMD3-204ENST00000376438 SMARCA2P51531 1590 aa35.72■■■■□ 3.31
FRMD3-204ENST00000376438 CCDC88BA6NC98 1476 aa35.71■■■■□ 3.31
FRMD3-204ENST00000376438 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
FRMD3-204ENST00000376438 NCAPD3P42695 1498 aa35.41■■■■□ 3.26
FRMD3-204ENST00000376438 HMGXB3Q12766 1538 aa35.34■■■■□ 3.25
FRMD3-204ENST00000376438 TRIM41Q8WV44 630 aa35.34■■■■□ 3.25
FRMD3-204ENST00000376438 CC2D2AQ9P2K1 1620 aa35.25■■■■□ 3.23
FRMD3-204ENST00000376438 ABCC8Q09428 1581 aa35.11■■■■□ 3.21
FRMD3-204ENST00000376438 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
FRMD3-204ENST00000376438 LOC105371045A0A1W2PR82 267 aa34.86■■■■□ 3.17
FRMD3-204ENST00000376438 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
FRMD3-204ENST00000376438 CFTRP13569 1480 aa34.71■■■■□ 3.15
FRMD3-204ENST00000376438 SYNJ1O43426 1573 aa34.64■■■■□ 3.14
FRMD3-204ENST00000376438 CADPSQ9ULU8 1353 aa34.57■■■■□ 3.12
FRMD3-204ENST00000376438 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
FRMD3-204ENST00000376438 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
FRMD3-204ENST00000376438 SOGA1O94964 1423 aa34.48■■■■□ 3.11
FRMD3-204ENST00000376438 PRDM2Q13029 1718 aa34.47■■■■□ 3.11
FRMD3-204ENST00000376438 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
FRMD3-204ENST00000376438 RUSC2Q8N2Y8 1516 aa34.38■■■■□ 3.09
FRMD3-204ENST00000376438 NESP48681 1621 aa34.36■■■■□ 3.09
FRMD3-204ENST00000376438 BIVM-ERCC5R4GMW8 1640 aa34.34■■■■□ 3.09
FRMD3-204ENST00000376438 CUX1P39880 1505 aa34.33■■■■□ 3.09
FRMD3-204ENST00000376438 FANCD2Q9BXW9 1451 aa34.22■■■■□ 3.07
FRMD3-204ENST00000376438 EEA1Q15075 1411 aa34.21■■■■□ 3.07
FRMD3-204ENST00000376438 CSRNP3Q8WYN3 585 aa34.18■■■■□ 3.06
FRMD3-204ENST00000376438 LAMC3Q9Y6N6 1575 aa34.16■■■■□ 3.06
FRMD3-204ENST00000376438 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
FRMD3-204ENST00000376438 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
FRMD3-204ENST00000376438 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
FRMD3-204ENST00000376438 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
FRMD3-204ENST00000376438 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
FRMD3-204ENST00000376438 KIF21AQ7Z4S6 1674 aa33.86■■■■□ 3.01
FRMD3-204ENST00000376438 GOLGA3Q08378 1498 aa33.86■■■■□ 3.01
FRMD3-204ENST00000376438 UBTFP17480 764 aaKnown RBP33.84■■■■□ 3.01
FRMD3-204ENST00000376438 KIF21BO75037 1637 aa33.82■■■■□ 3
FRMD3-204ENST00000376438 KIF27Q86VH2 1401 aa33.82■■■■□ 3
FRMD3-204ENST00000376438 URB2Q14146 1524 aaKnown RBP33.81■■■■□ 3
FRMD3-204ENST00000376438 TNIKQ9UKE5 1360 aa33.78■■■■□ 3
FRMD3-204ENST00000376438 CUX2O14529 1486 aa33.76■■■■□ 3
FRMD3-204ENST00000376438 POLA1P09884 1462 aaPredicted RBP33.74■■■□□ 2.99
FRMD3-204ENST00000376438 RAPGEF2Q9Y4G8 1499 aa33.74■■■□□ 2.99
FRMD3-204ENST00000376438 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
FRMD3-204ENST00000376438 CEP162Q5TB80 1403 aa33.68■■■□□ 2.98
FRMD3-204ENST00000376438 PRXQ9BXM0 1461 aa33.64■■■□□ 2.98
FRMD3-204ENST00000376438 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
FRMD3-204ENST00000376438 IGF1RP08069 1367 aa33.55■■■□□ 2.96
FRMD3-204ENST00000376438 ERICH3Q5RHP9 1530 aa33.54■■■□□ 2.96
FRMD3-204ENST00000376438 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
FRMD3-204ENST00000376438 WDR97A6NE52 1622 aa33.43■■■□□ 2.94
FRMD3-204ENST00000376438 RANGAP1P46060 587 aaPredicted RBP33.43■■■□□ 2.94
FRMD3-204ENST00000376438 PCGF6Q9BYE7 350 aa33.43■■■□□ 2.94
FRMD3-204ENST00000376438 ERCC6Q03468 1493 aa33.4■■■□□ 2.94
FRMD3-204ENST00000376438 CARMIL1Q5VZK9 1371 aa33.38■■■□□ 2.93
FRMD3-204ENST00000376438 TDRD9Q8NDG6 1382 aaKnown RBP33.38■■■□□ 2.93
FRMD3-204ENST00000376438 CLIP1P30622 1438 aa33.37■■■□□ 2.93
FRMD3-204ENST00000376438 TARBP1Q13395 1621 aaKnown RBP33.32■■■□□ 2.93
FRMD3-204ENST00000376438 PPARGC1BQ86YN6 1023 aaKnown RBP33.31■■■□□ 2.92
FRMD3-204ENST00000376438 WDR62O43379 1518 aa33.3■■■□□ 2.92
FRMD3-204ENST00000376438 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
FRMD3-204ENST00000376438 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
FRMD3-204ENST00000376438 TRIM26Q12899 539 aaPredicted RBP33.23■■■□□ 2.91
FRMD3-204ENST00000376438 THOC2Q8NI27 1593 aaKnown RBP33.19■■■□□ 2.9
FRMD3-204ENST00000376438 CUL7Q14999 1698 aa33.17■■■□□ 2.9
FRMD3-204ENST00000376438 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
FRMD3-204ENST00000376438 IFT140Q96RY7 1462 aa33.09■■■□□ 2.89
FRMD3-204ENST00000376438 VPS8Q8N3P4 1428 aa33.06■■■□□ 2.88
FRMD3-204ENST00000376438 ZNF608Q9ULD9 1512 aaPredicted RBP33.06■■■□□ 2.88
FRMD3-204ENST00000376438 TTBK1Q5TCY1 1321 aaPredicted RBP33.03■■■□□ 2.88
FRMD3-204ENST00000376438 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
FRMD3-204ENST00000376438 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
FRMD3-204ENST00000376438 ARHGAP35Q9NRY4 1499 aa32.99■■■□□ 2.87
FRMD3-204ENST00000376438 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
FRMD3-204ENST00000376438 CTTNBP2Q8WZ74 1663 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms