RNA–Protein interactions for RNA: ENST00000315891.10

SLC41A3-201, Transcript of solute carrier family 41 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC41A3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-201ENST00000315891 NISCHQ9Y2I1 1504 aa50.67■■■■■ 5.7
SLC41A3-201ENST00000315891 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
SLC41A3-201ENST00000315891 ABCC9O60706 1549 aa43.5■■■■■ 4.55
SLC41A3-201ENST00000315891 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
SLC41A3-201ENST00000315891 DCAF8L2P0C7V8 631 aa42.16■■■■■ 4.34
SLC41A3-201ENST00000315891 NACADO15069 1562 aa42.02■■■■■ 4.32
SLC41A3-201ENST00000315891 RB1CC1Q8TDY2 1594 aa41.97■■■■■ 4.31
SLC41A3-201ENST00000315891 DCAF1Q9Y4B6 1507 aa41.89■■■■■ 4.3
SLC41A3-201ENST00000315891 MYO15BQ96JP2 1530 aa41.88■■■■■ 4.29
SLC41A3-201ENST00000315891 UNC13AQ9UPW8 1703 aa41.17■■■■■ 4.18
SLC41A3-201ENST00000315891 SCRIBQ14160 1630 aa41.05■■■■■ 4.16
SLC41A3-201ENST00000315891 BICRAQ9NZM4 1560 aa40.76■■■■■ 4.12
SLC41A3-201ENST00000315891 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
SLC41A3-201ENST00000315891 SHROOM4Q9ULL8 1493 aa40.4■■■■■ 4.06
SLC41A3-201ENST00000315891 EIF4G1Q04637 1599 aaKnown RBP39.63■■■■□ 3.93
SLC41A3-201ENST00000315891 DNAJC5BQ9UF47 199 aa39.49■■■■□ 3.91
SLC41A3-201ENST00000315891 CECR2Q9BXF3 1484 aa39.48■■■■□ 3.91
SLC41A3-201ENST00000315891 CC2D2AQ9P2K1 1620 aa39.36■■■■□ 3.89
SLC41A3-201ENST00000315891 SMARCA4P51532 1647 aa39.26■■■■□ 3.88
SLC41A3-201ENST00000315891 BAZ1AQ9NRL2 1556 aaPredicted RBP39.23■■■■□ 3.87
SLC41A3-201ENST00000315891 MROH2BQ7Z745 1585 aa39.11■■■■□ 3.85
SLC41A3-201ENST00000315891 ATAD2BQ9ULI0 1458 aa38.89■■■■□ 3.82
SLC41A3-201ENST00000315891 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
SLC41A3-201ENST00000315891 PEG3Q9GZU2 1588 aa38.83■■■■□ 3.81
SLC41A3-201ENST00000315891 RSF1Q96T23 1441 aaPredicted RBP38.79■■■■□ 3.8
SLC41A3-201ENST00000315891 NCAPD3P42695 1498 aa38.76■■■■□ 3.79
SLC41A3-201ENST00000315891 WIZO95785 1651 aa38.74■■■■□ 3.79
SLC41A3-201ENST00000315891 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
SLC41A3-201ENST00000315891 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
SLC41A3-201ENST00000315891 TOP2AP11388 1531 aaKnown RBP38.3■■■■□ 3.72
SLC41A3-201ENST00000315891 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
SLC41A3-201ENST00000315891 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
SLC41A3-201ENST00000315891 NESP48681 1621 aa37.8■■■■□ 3.64
SLC41A3-201ENST00000315891 LAMC3Q9Y6N6 1575 aa37.69■■■■□ 3.62
SLC41A3-201ENST00000315891 CADPSQ9ULU8 1353 aa37.66■■■■□ 3.62
SLC41A3-201ENST00000315891 CFTRP13569 1480 aa37.55■■■■□ 3.6
SLC41A3-201ENST00000315891 ERCC6Q03468 1493 aa37.41■■■■□ 3.58
SLC41A3-201ENST00000315891 KIF21AQ7Z4S6 1674 aa37.39■■■■□ 3.58
SLC41A3-201ENST00000315891 PRDM2Q13029 1718 aa37.39■■■■□ 3.58
SLC41A3-201ENST00000315891 PDS5BQ9NTI5 1447 aa37.38■■■■□ 3.57
SLC41A3-201ENST00000315891 FANCD2Q9BXW9 1451 aa37.27■■■■□ 3.56
SLC41A3-201ENST00000315891 CEP164Q9UPV0 1460 aa37.17■■■■□ 3.54
SLC41A3-201ENST00000315891 THOC2Q8NI27 1593 aaKnown RBP37.12■■■■□ 3.53
SLC41A3-201ENST00000315891 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
SLC41A3-201ENST00000315891 WDR62O43379 1518 aa36.9■■■■□ 3.5
SLC41A3-201ENST00000315891 URB2Q14146 1524 aaKnown RBP36.9■■■■□ 3.5
SLC41A3-201ENST00000315891 CUX2O14529 1486 aa36.8■■■■□ 3.48
SLC41A3-201ENST00000315891 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
SLC41A3-201ENST00000315891 DNMBPQ6XZF7 1577 aa36.73■■■■□ 3.47
SLC41A3-201ENST00000315891 ABCC8Q09428 1581 aa36.69■■■■□ 3.46
SLC41A3-201ENST00000315891 CUX1P39880 1505 aa36.66■■■■□ 3.46
SLC41A3-201ENST00000315891 WRNQ14191 1432 aaPredicted RBP eCLIP36.55■■■■□ 3.44
SLC41A3-201ENST00000315891 SYNJ1O43426 1573 aa36.51■■■■□ 3.44
SLC41A3-201ENST00000315891 POLA1P09884 1462 aaPredicted RBP36.47■■■■□ 3.43
SLC41A3-201ENST00000315891 FGD5Q6ZNL6 1462 aa36.45■■■■□ 3.43
SLC41A3-201ENST00000315891 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.43
SLC41A3-201ENST00000315891 TOP2BQ02880 1626 aa36.45■■■■□ 3.43
SLC41A3-201ENST00000315891 IFT140Q96RY7 1462 aa36.34■■■■□ 3.41
SLC41A3-201ENST00000315891 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.41
SLC41A3-201ENST00000315891 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.41
SLC41A3-201ENST00000315891 SOGA1O94964 1423 aa36.27■■■■□ 3.4
SLC41A3-201ENST00000315891 ZNF608Q9ULD9 1512 aaPredicted RBP36.23■■■■□ 3.39
SLC41A3-201ENST00000315891 WDR97A6NE52 1622 aa36.18■■■■□ 3.38
SLC41A3-201ENST00000315891 EIF4G3O43432 1585 aaKnown RBP36.12■■■■□ 3.37
SLC41A3-201ENST00000315891 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
SLC41A3-201ENST00000315891 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.363e-7■■■■■ 30.5
SLC41A3-201ENST00000315891 TDRD9Q8NDG6 1382 aaKnown RBP36.05■■■■□ 3.36
SLC41A3-201ENST00000315891 TRIM41Q8WV44 630 aa35.97■■■■□ 3.35
SLC41A3-201ENST00000315891 ABCA5Q8WWZ7 1642 aa35.95■■■■□ 3.35
SLC41A3-201ENST00000315891 GAPVD1Q14C86 1478 aa35.88■■■■□ 3.33
SLC41A3-201ENST00000315891 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
SLC41A3-201ENST00000315891 PBRM1Q86U86 1689 aa35.86■■■■□ 3.33
SLC41A3-201ENST00000315891 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
SLC41A3-201ENST00000315891 SNAPC4Q5SXM2 1469 aa35.74■■■■□ 3.31
SLC41A3-201ENST00000315891 KIF27Q86VH2 1401 aa35.72■■■■□ 3.31
SLC41A3-201ENST00000315891 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
SLC41A3-201ENST00000315891 ERICH3Q5RHP9 1530 aa35.65■■■■□ 3.3
SLC41A3-201ENST00000315891 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
SLC41A3-201ENST00000315891 CHD1O14646 1710 aa35.6■■■■□ 3.29
SLC41A3-201ENST00000315891 ADAMTS12P58397 1594 aa35.58■■■■□ 3.29
SLC41A3-201ENST00000315891 SYNJ2O15056 1496 aa35.52■■■■□ 3.28
SLC41A3-201ENST00000315891 IGF1RP08069 1367 aa35.52■■■■□ 3.28
SLC41A3-201ENST00000315891 FBLN2P98095 1184 aa35.51■■■■□ 3.27
SLC41A3-201ENST00000315891 FHAD1B1AJZ9 1412 aa35.46■■■■□ 3.27
SLC41A3-201ENST00000315891 CUL7Q14999 1698 aa35.44■■■■□ 3.26
SLC41A3-201ENST00000315891 CHMP7Q8WUX9 453 aaPredicted RBP35.43■■■■□ 3.26
SLC41A3-201ENST00000315891 GRIN2AQ12879 1464 aa35.37■■■■□ 3.25
SLC41A3-201ENST00000315891 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
SLC41A3-201ENST00000315891 CARMIL1Q5VZK9 1371 aa35.32■■■■□ 3.24
SLC41A3-201ENST00000315891 EEA1Q15075 1411 aa35.3■■■■□ 3.24
SLC41A3-201ENST00000315891 FAM9AQ8IZU1 332 aaPredicted RBP35.3■■■■□ 3.24
SLC41A3-201ENST00000315891 CEP170Q5SW79 1584 aa35.22■■■■□ 3.23
SLC41A3-201ENST00000315891 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
SLC41A3-201ENST00000315891 NUP160Q12769 1436 aa35.17■■■■□ 3.22
SLC41A3-201ENST00000315891 PRXQ9BXM0 1461 aa35.17■■■■□ 3.22
SLC41A3-201ENST00000315891 RAPGEF2Q9Y4G8 1499 aa35.17■■■■□ 3.22
SLC41A3-201ENST00000315891 CLASP1Q7Z460 1538 aa35.16■■■■□ 3.22
SLC41A3-201ENST00000315891 DNAJC5Q9H3Z4 198 aa35.12■■■■□ 3.21
SLC41A3-201ENST00000315891 KIF21BO75037 1637 aa34.99■■■■□ 3.19
SLC41A3-201ENST00000315891 KIAA0586Q9BVV6 1533 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms