RNA–Protein interactions for RNA: ENST00000404910.6

RAMP1-203, Transcript of receptor activity modifying protein 1, humanhuman

TSL 2 BASIC

Gene RAMP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP1-203ENST00000404910 NISCHQ9Y2I1 1504 aa51.62■■■■■ 5.85
RAMP1-203ENST00000404910 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
RAMP1-203ENST00000404910 ABCC9O60706 1549 aa44.81■■■■■ 4.76
RAMP1-203ENST00000404910 RB1CC1Q8TDY2 1594 aa43.19■■■■■ 4.5
RAMP1-203ENST00000404910 NACADO15069 1562 aa43.18■■■■■ 4.5
RAMP1-203ENST00000404910 ZCCHC6Q5VYS8 1495 aaKnown RBP43.02■■■■■ 4.48
RAMP1-203ENST00000404910 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
RAMP1-203ENST00000404910 DCAF8L2P0C7V8 631 aa42.95■■■■■ 4.47
RAMP1-203ENST00000404910 DCAF1Q9Y4B6 1507 aa42.8■■■■■ 4.44
RAMP1-203ENST00000404910 UNC13AQ9UPW8 1703 aa42.06■■■■■ 4.32
RAMP1-203ENST00000404910 BICRAQ9NZM4 1560 aa41.85■■■■■ 4.29
RAMP1-203ENST00000404910 PABPN1Q86U42 306 aaKnown RBP eCLIP41.85■■■■■ 4.29
RAMP1-203ENST00000404910 SCRIBQ14160 1630 aa41.78■■■■■ 4.28
RAMP1-203ENST00000404910 DNAJC5BQ9UF47 199 aa41.6■■■■■ 4.25
RAMP1-203ENST00000404910 SHROOM4Q9ULL8 1493 aa41.6■■■■■ 4.25
RAMP1-203ENST00000404910 EIF4G1Q04637 1599 aaKnown RBP40.76■■■■■ 4.12
RAMP1-203ENST00000404910 CC2D2AQ9P2K1 1620 aa40.56■■■■■ 4.08
RAMP1-203ENST00000404910 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
RAMP1-203ENST00000404910 SMARCA4P51532 1647 aa40.02■■■■■ 4
RAMP1-203ENST00000404910 BAZ1AQ9NRL2 1556 aaPredicted RBP40.01■■■■■ 4
RAMP1-203ENST00000404910 NCAPD3P42695 1498 aa39.86■■■■□ 3.97
RAMP1-203ENST00000404910 ATAD2BQ9ULI0 1458 aa39.83■■■■□ 3.97
RAMP1-203ENST00000404910 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
RAMP1-203ENST00000404910 MROH2BQ7Z745 1585 aa39.73■■■■□ 3.95
RAMP1-203ENST00000404910 PEG3Q9GZU2 1588 aa39.71■■■■□ 3.95
RAMP1-203ENST00000404910 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
RAMP1-203ENST00000404910 BAZ1BQ9UIG0 1483 aaKnown RBP39.49■■■■□ 3.91
RAMP1-203ENST00000404910 RSF1Q96T23 1441 aaPredicted RBP39.31■■■■□ 3.88
RAMP1-203ENST00000404910 WIZO95785 1651 aa39.24■■■■□ 3.87
RAMP1-203ENST00000404910 TOP2AP11388 1531 aaKnown RBP38.94■■■■□ 3.82
RAMP1-203ENST00000404910 LAMC3Q9Y6N6 1575 aa38.77■■■■□ 3.8
RAMP1-203ENST00000404910 NESP48681 1621 aa38.77■■■■□ 3.8
RAMP1-203ENST00000404910 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
RAMP1-203ENST00000404910 CADPSQ9ULU8 1353 aa38.67■■■■□ 3.78
RAMP1-203ENST00000404910 CUX2O14529 1486 aa38.56■■■■□ 3.76
RAMP1-203ENST00000404910 PDS5BQ9NTI5 1447 aa38.54■■■■□ 3.76
RAMP1-203ENST00000404910 CCDC88BA6NC98 1476 aa38.45■■■■□ 3.75
RAMP1-203ENST00000404910 CFTRP13569 1480 aa38.45■■■■□ 3.75
RAMP1-203ENST00000404910 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
RAMP1-203ENST00000404910 THOC2Q8NI27 1593 aaKnown RBP38.23■■■■□ 3.71
RAMP1-203ENST00000404910 FANCD2Q9BXW9 1451 aa38.2■■■■□ 3.71
RAMP1-203ENST00000404910 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
RAMP1-203ENST00000404910 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
RAMP1-203ENST00000404910 MRC2Q9UBG0 1479 aa38.11■■■■□ 3.69
RAMP1-203ENST00000404910 DNAJC5Q9H3Z4 198 aa38.1■■■■□ 3.69
RAMP1-203ENST00000404910 PRDM2Q13029 1718 aa38.06■■■■□ 3.68
RAMP1-203ENST00000404910 WDR62O43379 1518 aa38■■■■□ 3.67
RAMP1-203ENST00000404910 URB2Q14146 1524 aaKnown RBP37.8■■■■□ 3.64
RAMP1-203ENST00000404910 ABCC8Q09428 1581 aa37.65■■■■□ 3.62
RAMP1-203ENST00000404910 TOPBP1Q92547 1522 aa37.58■■■■□ 3.61
RAMP1-203ENST00000404910 DNMBPQ6XZF7 1577 aa37.55■■■■□ 3.6
RAMP1-203ENST00000404910 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
RAMP1-203ENST00000404910 CUX1P39880 1505 aa37.29■■■■□ 3.56
RAMP1-203ENST00000404910 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
RAMP1-203ENST00000404910 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
RAMP1-203ENST00000404910 FGD5Q6ZNL6 1462 aa37.16■■■■□ 3.54
RAMP1-203ENST00000404910 ZNF608Q9ULD9 1512 aaPredicted RBP37.14■■■■□ 3.54
RAMP1-203ENST00000404910 SOGA1O94964 1423 aa37.1■■■■□ 3.53
RAMP1-203ENST00000404910 WRNQ14191 1432 aaPredicted RBP eCLIP37.08■■■■□ 3.53
RAMP1-203ENST00000404910 RAD54L2Q9Y4B4 1467 aa37.05■■■■□ 3.52
RAMP1-203ENST00000404910 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
RAMP1-203ENST00000404910 TOP2BQ02880 1626 aa36.99■■■■□ 3.51
RAMP1-203ENST00000404910 WDR97A6NE52 1622 aa36.97■■■■□ 3.51
RAMP1-203ENST00000404910 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
RAMP1-203ENST00000404910 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
RAMP1-203ENST00000404910 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.5
RAMP1-203ENST00000404910 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
RAMP1-203ENST00000404910 OSCARQ8IYS5 282 aa36.86■■■■□ 3.49
RAMP1-203ENST00000404910 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
RAMP1-203ENST00000404910 GRIN2BQ13224 1484 aa36.71■■■■□ 3.47
RAMP1-203ENST00000404910 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
RAMP1-203ENST00000404910 ABCA5Q8WWZ7 1642 aa36.67■■■■□ 3.46
RAMP1-203ENST00000404910 MAGI1Q96QZ7 1491 aaPredicted RBP36.63■■■■□ 3.45
RAMP1-203ENST00000404910 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
RAMP1-203ENST00000404910 PBRM1Q86U86 1689 aa36.53■■■■□ 3.44
RAMP1-203ENST00000404910 TRIM41Q8WV44 630 aa36.51■■■■□ 3.44
RAMP1-203ENST00000404910 SYNJ2O15056 1496 aa36.48■■■■□ 3.43
RAMP1-203ENST00000404910 CHD1O14646 1710 aa36.47■■■■□ 3.43
RAMP1-203ENST00000404910 FBLN2P98095 1184 aa36.44■■■■□ 3.42
RAMP1-203ENST00000404910 ERICH3Q5RHP9 1530 aa36.42■■■■□ 3.42
RAMP1-203ENST00000404910 CHMP7Q8WUX9 453 aaPredicted RBP36.4■■■■□ 3.42
RAMP1-203ENST00000404910 ADAMTS12P58397 1594 aa36.32■■■■□ 3.41
RAMP1-203ENST00000404910 KIF27Q86VH2 1401 aa36.32■■■■□ 3.4
RAMP1-203ENST00000404910 FHAD1B1AJZ9 1412 aa36.3■■■■□ 3.4
RAMP1-203ENST00000404910 RIMBP3CA6NJZ7 1639 aa36.23■■■■□ 3.39
RAMP1-203ENST00000404910 RIMBP3BA6NNM3 1639 aa36.23■■■■□ 3.39
RAMP1-203ENST00000404910 RIMBP3Q9UFD9 1639 aa36.23■■■■□ 3.39
RAMP1-203ENST00000404910 GRIN2AQ12879 1464 aa36.22■■■■□ 3.39
RAMP1-203ENST00000404910 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
RAMP1-203ENST00000404910 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
RAMP1-203ENST00000404910 IGF1RP08069 1367 aa36.15■■■■□ 3.38
RAMP1-203ENST00000404910 NUP160Q12769 1436 aa36.09■■■■□ 3.37
RAMP1-203ENST00000404910 CUL7Q14999 1698 aa36.06■■■■□ 3.36
RAMP1-203ENST00000404910 CEP170Q5SW79 1584 aa36■■■■□ 3.35
RAMP1-203ENST00000404910 CARMIL1Q5VZK9 1371 aa35.92■■■■□ 3.34
RAMP1-203ENST00000404910 CYB5RLQ6IPT4 315 aa35.9■■■■□ 3.34
RAMP1-203ENST00000404910 RUSC2Q8N2Y8 1516 aa35.87■■■■□ 3.33
RAMP1-203ENST00000404910 ARAP1Q96P48 1450 aa35.83■■■■□ 3.33
RAMP1-203ENST00000404910 SHROOM2Q13796 1616 aa35.79■■■■□ 3.32
RAMP1-203ENST00000404910 KIAA0586Q9BVV6 1533 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms