RNA–Protein interactions for RNA: ENST00000560839.1

AC012414.4-201, humanhuman

TSL 5 BASIC

Gene AC012414.4, Length 1,074 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012414.4-201ENST00000560839 NISCHQ9Y2I1 1504 aa52.45■■■■■ 5.99
AC012414.4-201ENST00000560839 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
AC012414.4-201ENST00000560839 ABCC9O60706 1549 aa46.15■■■■■ 4.98
AC012414.4-201ENST00000560839 RB1CC1Q8TDY2 1594 aa44.22■■■■■ 4.67
AC012414.4-201ENST00000560839 NACADO15069 1562 aa44.06■■■■■ 4.64
AC012414.4-201ENST00000560839 DCAF8L2P0C7V8 631 aa43.99■■■■■ 4.63
AC012414.4-201ENST00000560839 MYO15BQ96JP2 1530 aa43.64■■■■■ 4.58
AC012414.4-201ENST00000560839 ZCCHC6Q5VYS8 1495 aaKnown RBP43.6■■■■■ 4.57
AC012414.4-201ENST00000560839 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
AC012414.4-201ENST00000560839 DCAF1Q9Y4B6 1507 aa43.34■■■■■ 4.53
AC012414.4-201ENST00000560839 PABPN1Q86U42 306 aaKnown RBP eCLIP43.05■■■■■ 4.48
AC012414.4-201ENST00000560839 BICRAQ9NZM4 1560 aa42.93■■■■■ 4.46
AC012414.4-201ENST00000560839 SCRIBQ14160 1630 aa42.71■■■■■ 4.43
AC012414.4-201ENST00000560839 DNAJC5BQ9UF47 199 aa42.69■■■■■ 4.42
AC012414.4-201ENST00000560839 SHROOM4Q9ULL8 1493 aa42.33■■■■■ 4.37
AC012414.4-201ENST00000560839 EIF4G1Q04637 1599 aaKnown RBP41.8■■■■■ 4.28
AC012414.4-201ENST00000560839 CC2D2AQ9P2K1 1620 aa41.76■■■■■ 4.28
AC012414.4-201ENST00000560839 CECR2Q9BXF3 1484 aa41.47■■■■■ 4.23
AC012414.4-201ENST00000560839 SMARCA4P51532 1647 aa40.81■■■■■ 4.12
AC012414.4-201ENST00000560839 BAZ1AQ9NRL2 1556 aaPredicted RBP40.67■■■■■ 4.1
AC012414.4-201ENST00000560839 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
AC012414.4-201ENST00000560839 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
AC012414.4-201ENST00000560839 SMARCA2P51531 1590 aa40.57■■■■■ 4.08
AC012414.4-201ENST00000560839 MROH2BQ7Z745 1585 aa40.44■■■■■ 4.06
AC012414.4-201ENST00000560839 HMGXB3Q12766 1538 aa40.42■■■■■ 4.06
AC012414.4-201ENST00000560839 PEG3Q9GZU2 1588 aa40.37■■■■■ 4.05
AC012414.4-201ENST00000560839 BAZ1BQ9UIG0 1483 aaKnown RBP40.28■■■■■ 4.04
AC012414.4-201ENST00000560839 WIZO95785 1651 aa40.05■■■■■ 4
AC012414.4-201ENST00000560839 NESP48681 1621 aa39.85■■■■□ 3.97
AC012414.4-201ENST00000560839 RSF1Q96T23 1441 aaPredicted RBP39.81■■■■□ 3.96
AC012414.4-201ENST00000560839 ERCC6Q03468 1493 aa39.77■■■■□ 3.96
AC012414.4-201ENST00000560839 LAMC3Q9Y6N6 1575 aa39.67■■■■□ 3.94
AC012414.4-201ENST00000560839 TOP2AP11388 1531 aaKnown RBP39.52■■■■□ 3.92
AC012414.4-201ENST00000560839 CUX2O14529 1486 aa39.46■■■■□ 3.91
AC012414.4-201ENST00000560839 KIF21AQ7Z4S6 1674 aa39.44■■■■□ 3.9
AC012414.4-201ENST00000560839 CADPSQ9ULU8 1353 aa39.44■■■■□ 3.9
AC012414.4-201ENST00000560839 PDS5BQ9NTI5 1447 aa39.37■■■■□ 3.89
AC012414.4-201ENST00000560839 THOC2Q8NI27 1593 aaKnown RBP39.33■■■■□ 3.89
AC012414.4-201ENST00000560839 CFTRP13569 1480 aa39.13■■■■□ 3.85
AC012414.4-201ENST00000560839 CCDC88BA6NC98 1476 aa39.06■■■■□ 3.84
AC012414.4-201ENST00000560839 FANCD2Q9BXW9 1451 aa39.01■■■■□ 3.84
AC012414.4-201ENST00000560839 MRC2Q9UBG0 1479 aa39■■■■□ 3.83
AC012414.4-201ENST00000560839 CEP164Q9UPV0 1460 aa38.99■■■■□ 3.83
AC012414.4-201ENST00000560839 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
AC012414.4-201ENST00000560839 WDR62O43379 1518 aa38.89■■■■□ 3.82
AC012414.4-201ENST00000560839 DNAJC5Q9H3Z4 198 aa38.69■■■■□ 3.78
AC012414.4-201ENST00000560839 URB2Q14146 1524 aaKnown RBP38.67■■■■□ 3.78
AC012414.4-201ENST00000560839 SUPT5HO00267 1087 aaKnown RBP38.57■■■■□ 3.76
AC012414.4-201ENST00000560839 TOPBP1Q92547 1522 aa38.37■■■■□ 3.73
AC012414.4-201ENST00000560839 ABCC8Q09428 1581 aa38.31■■■■□ 3.72
AC012414.4-201ENST00000560839 DNMBPQ6XZF7 1577 aa38.29■■■■□ 3.72
AC012414.4-201ENST00000560839 IFT140Q96RY7 1462 aa38.17■■■■□ 3.7
AC012414.4-201ENST00000560839 ZNF608Q9ULD9 1512 aaPredicted RBP38.08■■■■□ 3.69
AC012414.4-201ENST00000560839 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.67
AC012414.4-201ENST00000560839 POLA1P09884 1462 aaPredicted RBP38■■■■□ 3.67
AC012414.4-201ENST00000560839 CUX1P39880 1505 aa37.96■■■■□ 3.67
AC012414.4-201ENST00000560839 EIF4G3O43432 1585 aaKnown RBP37.93■■■■□ 3.66
AC012414.4-201ENST00000560839 FGD5Q6ZNL6 1462 aa37.87■■■■□ 3.65
AC012414.4-201ENST00000560839 RAD54L2Q9Y4B4 1467 aa37.86■■■■□ 3.65
AC012414.4-201ENST00000560839 SOGA1O94964 1423 aa37.84■■■■□ 3.65
AC012414.4-201ENST00000560839 AQRO60306 1485 aaKnown RBP eCLIP37.81■■■■□ 3.64
AC012414.4-201ENST00000560839 OSCARQ8IYS5 282 aa37.78■■■■□ 3.64
AC012414.4-201ENST00000560839 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
AC012414.4-201ENST00000560839 WDR97A6NE52 1622 aa37.64■■■■□ 3.62
AC012414.4-201ENST00000560839 CHD1O14646 1710 aa37.6■■■■□ 3.61
AC012414.4-201ENST00000560839 BIVM-ERCC5R4GMW8 1640 aa37.57■■■■□ 3.6
AC012414.4-201ENST00000560839 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.6
AC012414.4-201ENST00000560839 TOP2BQ02880 1626 aa37.54■■■■□ 3.6
AC012414.4-201ENST00000560839 SYNJ1O43426 1573 aa37.52■■■■□ 3.6
AC012414.4-201ENST00000560839 ABCA10Q8WWZ4 1543 aa37.46■■■■□ 3.59
AC012414.4-201ENST00000560839 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
AC012414.4-201ENST00000560839 PBRM1Q86U86 1689 aa37.44■■■■□ 3.58
AC012414.4-201ENST00000560839 FBLN2P98095 1184 aa37.43■■■■□ 3.58
AC012414.4-201ENST00000560839 GRIN2BQ13224 1484 aa37.43■■■■□ 3.58
AC012414.4-201ENST00000560839 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
AC012414.4-201ENST00000560839 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
AC012414.4-201ENST00000560839 MAGI1Q96QZ7 1491 aaPredicted RBP37.36■■■■□ 3.57
AC012414.4-201ENST00000560839 TRIM41Q8WV44 630 aa37.29■■■■□ 3.56
AC012414.4-201ENST00000560839 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
AC012414.4-201ENST00000560839 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
AC012414.4-201ENST00000560839 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
AC012414.4-201ENST00000560839 CHMP7Q8WUX9 453 aaPredicted RBP37.24■■■■□ 3.55
AC012414.4-201ENST00000560839 SYNJ2O15056 1496 aa37.22■■■■□ 3.55
AC012414.4-201ENST00000560839 ARHGEF11O15085 1522 aa37.19■■■■□ 3.54
AC012414.4-201ENST00000560839 CLASP1Q7Z460 1538 aa37.09■■■■□ 3.53
AC012414.4-201ENST00000560839 ADAMTS12P58397 1594 aa37.04■■■■□ 3.52
AC012414.4-201ENST00000560839 ERICH3Q5RHP9 1530 aa37.01■■■■□ 3.52
AC012414.4-201ENST00000560839 GRIN2AQ12879 1464 aa36.95■■■■□ 3.51
AC012414.4-201ENST00000560839 FHAD1B1AJZ9 1412 aa36.93■■■■□ 3.5
AC012414.4-201ENST00000560839 CYB5RLQ6IPT4 315 aa36.87■■■■□ 3.49
AC012414.4-201ENST00000560839 ARAP1Q96P48 1450 aa36.87■■■■□ 3.49
AC012414.4-201ENST00000560839 CEP170Q5SW79 1584 aa36.83■■■■□ 3.49
AC012414.4-201ENST00000560839 NUP160Q12769 1436 aa36.79■■■■□ 3.48
AC012414.4-201ENST00000560839 KIF27Q86VH2 1401 aa36.76■■■■□ 3.48
AC012414.4-201ENST00000560839 IGF1RP08069 1367 aa36.68■■■■□ 3.46
AC012414.4-201ENST00000560839 CUL7Q14999 1698 aa36.65■■■■□ 3.46
AC012414.4-201ENST00000560839 SHROOM2Q13796 1616 aa36.61■■■■□ 3.45
AC012414.4-201ENST00000560839 ERCC6L2Q5T890 1561 aa36.59■■■■□ 3.45
AC012414.4-201ENST00000560839 RUSC2Q8N2Y8 1516 aa36.51■■■■□ 3.44
AC012414.4-201ENST00000560839 CARMIL1Q5VZK9 1371 aa36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms