RNA–Protein interactions for RNA: ENST00000491660.1

SERP1-208, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

TSL 2 BASIC

Gene SERP1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-208ENST00000491660 NISCHQ9Y2I1 1504 aa50.97■■■■■ 5.75
SERP1-208ENST00000491660 CCDC180Q9P1Z9 1646 aa45.18■■■■■ 4.82
SERP1-208ENST00000491660 ABCC9O60706 1549 aa44.04■■■■■ 4.64
SERP1-208ENST00000491660 DCAF8L2P0C7V8 631 aa42.58■■■■■ 4.41
SERP1-208ENST00000491660 ZCCHC6Q5VYS8 1495 aaKnown RBP42.5■■■■■ 4.39
SERP1-208ENST00000491660 RB1CC1Q8TDY2 1594 aa42.42■■■■■ 4.38
SERP1-208ENST00000491660 NACADO15069 1562 aa42.41■■■■■ 4.38
SERP1-208ENST00000491660 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
SERP1-208ENST00000491660 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
SERP1-208ENST00000491660 UNC13AQ9UPW8 1703 aa41.48■■■■■ 4.23
SERP1-208ENST00000491660 SCRIBQ14160 1630 aa41.33■■■■■ 4.21
SERP1-208ENST00000491660 PABPN1Q86U42 306 aaKnown RBP eCLIP41.22■■■■■ 4.19
SERP1-208ENST00000491660 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.18
SERP1-208ENST00000491660 SHROOM4Q9ULL8 1493 aa40.65■■■■■ 4.1
SERP1-208ENST00000491660 DNAJC5BQ9UF47 199 aa40.17■■■■■ 4.02
SERP1-208ENST00000491660 EIF4G1Q04637 1599 aaKnown RBP40.03■■■■■ 4
SERP1-208ENST00000491660 CC2D2AQ9P2K1 1620 aa39.82■■■■□ 3.96
SERP1-208ENST00000491660 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
SERP1-208ENST00000491660 SMARCA4P51532 1647 aa39.51■■■■□ 3.91
SERP1-208ENST00000491660 BAZ1AQ9NRL2 1556 aaPredicted RBP39.48■■■■□ 3.91
SERP1-208ENST00000491660 MROH2BQ7Z745 1585 aa39.31■■■■□ 3.88
SERP1-208ENST00000491660 ATAD2BQ9ULI0 1458 aa39.22■■■■□ 3.87
SERP1-208ENST00000491660 SMARCA2P51531 1590 aa39.17■■■■□ 3.86
SERP1-208ENST00000491660 NCAPD3P42695 1498 aa39.12■■■■□ 3.85
SERP1-208ENST00000491660 PEG3Q9GZU2 1588 aa39.06■■■■□ 3.84
SERP1-208ENST00000491660 HMGXB3Q12766 1538 aa38.96■■■■□ 3.83
SERP1-208ENST00000491660 RSF1Q96T23 1441 aaPredicted RBP38.94■■■■□ 3.82
SERP1-208ENST00000491660 BAZ1BQ9UIG0 1483 aaKnown RBP38.92■■■■□ 3.82
SERP1-208ENST00000491660 WIZO95785 1651 aa38.91■■■■□ 3.82
SERP1-208ENST00000491660 TOP2AP11388 1531 aaKnown RBP38.48■■■■□ 3.75
SERP1-208ENST00000491660 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
SERP1-208ENST00000491660 NESP48681 1621 aa38.18■■■■□ 3.7
SERP1-208ENST00000491660 LAMC3Q9Y6N6 1575 aa38.07■■■■□ 3.69
SERP1-208ENST00000491660 CCDC88BA6NC98 1476 aa38.04■■■■□ 3.68
SERP1-208ENST00000491660 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
SERP1-208ENST00000491660 ERCC6Q03468 1493 aa37.93■■■■□ 3.66
SERP1-208ENST00000491660 CFTRP13569 1480 aa37.84■■■■□ 3.65
SERP1-208ENST00000491660 PDS5BQ9NTI5 1447 aa37.81■■■■□ 3.64
SERP1-208ENST00000491660 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
SERP1-208ENST00000491660 FANCD2Q9BXW9 1451 aa37.61■■■■□ 3.61
SERP1-208ENST00000491660 PRDM2Q13029 1718 aa37.58■■■■□ 3.61
SERP1-208ENST00000491660 CEP164Q9UPV0 1460 aa37.54■■■■□ 3.6
SERP1-208ENST00000491660 THOC2Q8NI27 1593 aaKnown RBP37.51■■■■□ 3.6
SERP1-208ENST00000491660 MRC2Q9UBG0 1479 aa37.43■■■■□ 3.58
SERP1-208ENST00000491660 CUX2O14529 1486 aa37.38■■■■□ 3.57
SERP1-208ENST00000491660 WDR62O43379 1518 aa37.28■■■■□ 3.56
SERP1-208ENST00000491660 URB2Q14146 1524 aaKnown RBP37.22■■■■□ 3.55
SERP1-208ENST00000491660 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
SERP1-208ENST00000491660 DNMBPQ6XZF7 1577 aa37.01■■■■□ 3.52
SERP1-208ENST00000491660 ABCC8Q09428 1581 aa37■■■■□ 3.51
SERP1-208ENST00000491660 CUX1P39880 1505 aa36.86■■■■□ 3.49
SERP1-208ENST00000491660 POLA1P09884 1462 aaPredicted RBP36.74■■■■□ 3.47
SERP1-208ENST00000491660 IFT140Q96RY7 1462 aa36.73■■■■□ 3.47
SERP1-208ENST00000491660 WRNQ14191 1432 aaPredicted RBP eCLIP36.71■■■■□ 3.47
SERP1-208ENST00000491660 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
SERP1-208ENST00000491660 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
SERP1-208ENST00000491660 RAD54L2Q9Y4B4 1467 aa36.61■■■■□ 3.45
SERP1-208ENST00000491660 TARBP1Q13395 1621 aaKnown RBP36.6■■■■□ 3.45
SERP1-208ENST00000491660 SOGA1O94964 1423 aa36.59■■■■□ 3.45
SERP1-208ENST00000491660 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
SERP1-208ENST00000491660 BIVM-ERCC5R4GMW8 1640 aa36.59■■■■□ 3.45
SERP1-208ENST00000491660 ZNF608Q9ULD9 1512 aaPredicted RBP36.57■■■■□ 3.44
SERP1-208ENST00000491660 EIF4G3O43432 1585 aaKnown RBP36.43■■■■□ 3.42
SERP1-208ENST00000491660 AQRO60306 1485 aaKnown RBP eCLIP36.4■■■■□ 3.422e-6■■■□□ 15.2
SERP1-208ENST00000491660 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
SERP1-208ENST00000491660 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
SERP1-208ENST00000491660 ABCA10Q8WWZ4 1543 aa36.33■■■■□ 3.41
SERP1-208ENST00000491660 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
SERP1-208ENST00000491660 ABCA5Q8WWZ7 1642 aa36.17■■■■□ 3.38
SERP1-208ENST00000491660 GRIN2BQ13224 1484 aa36.13■■■■□ 3.37
SERP1-208ENST00000491660 PBRM1Q86U86 1689 aa36.1■■■■□ 3.37
SERP1-208ENST00000491660 SNAPC4Q5SXM2 1469 aa36.07■■■■□ 3.37
SERP1-208ENST00000491660 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
SERP1-208ENST00000491660 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
SERP1-208ENST00000491660 FBLN2P98095 1184 aa35.96■■■■□ 3.35
SERP1-208ENST00000491660 DNAJC5Q9H3Z4 198 aa35.95■■■■□ 3.35
SERP1-208ENST00000491660 CHD1O14646 1710 aa35.94■■■■□ 3.34
SERP1-208ENST00000491660 KIF27Q86VH2 1401 aa35.92■■■■□ 3.34
SERP1-208ENST00000491660 OSCARQ8IYS5 282 aa35.91■■■■□ 3.34
SERP1-208ENST00000491660 ERICH3Q5RHP9 1530 aa35.89■■■■□ 3.34
SERP1-208ENST00000491660 CHMP7Q8WUX9 453 aaPredicted RBP35.86■■■■□ 3.33
SERP1-208ENST00000491660 SYNJ2O15056 1496 aa35.86■■■■□ 3.33
SERP1-208ENST00000491660 ADAMTS12P58397 1594 aa35.82■■■■□ 3.32
SERP1-208ENST00000491660 CHIC1Q5VXU3 224 aa35.78■■■■□ 3.32
SERP1-208ENST00000491660 FHAD1B1AJZ9 1412 aa35.76■■■■□ 3.32
SERP1-208ENST00000491660 IGF1RP08069 1367 aa35.74■■■■□ 3.31
SERP1-208ENST00000491660 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
SERP1-208ENST00000491660 GRIN2AQ12879 1464 aa35.67■■■■□ 3.3
SERP1-208ENST00000491660 CUL7Q14999 1698 aa35.63■■■■□ 3.29
SERP1-208ENST00000491660 CARMIL1Q5VZK9 1371 aa35.55■■■■□ 3.28
SERP1-208ENST00000491660 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
SERP1-208ENST00000491660 CEP170Q5SW79 1584 aa35.49■■■■□ 3.27
SERP1-208ENST00000491660 NUP160Q12769 1436 aa35.49■■■■□ 3.27
SERP1-208ENST00000491660 EEA1Q15075 1411 aa35.38■■■■□ 3.25
SERP1-208ENST00000491660 RAPGEF2Q9Y4G8 1499 aa35.36■■■■□ 3.25
SERP1-208ENST00000491660 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
SERP1-208ENST00000491660 CSRNP3Q8WYN3 585 aa35.34■■■■□ 3.25
SERP1-208ENST00000491660 ARHGEF11O15085 1522 aa35.32■■■■□ 3.25
SERP1-208ENST00000491660 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
SERP1-208ENST00000491660 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms