RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 NISCHQ9Y2I1 1504 aa52.62■■■■■ 6.01
UBE2D3-201ENST00000321805 CCDC180Q9P1Z9 1646 aa47.08■■■■■ 5.13
UBE2D3-201ENST00000321805 ABCC9O60706 1549 aa46.32■■■■■ 5.01
UBE2D3-201ENST00000321805 RB1CC1Q8TDY2 1594 aa44.48■■■■■ 4.71
UBE2D3-201ENST00000321805 NACADO15069 1562 aa44.35■■■■■ 4.69
UBE2D3-201ENST00000321805 MYO15BQ96JP2 1530 aa44.01■■■■■ 4.64
UBE2D3-201ENST00000321805 DCAF8L2P0C7V8 631 aa43.95■■■■■ 4.63
UBE2D3-201ENST00000321805 ZCCHC6Q5VYS8 1495 aaKnown RBP43.76■■■■■ 4.6
UBE2D3-201ENST00000321805 DCAF1Q9Y4B6 1507 aa43.62■■■■■ 4.57
UBE2D3-201ENST00000321805 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
UBE2D3-201ENST00000321805 PABPN1Q86U42 306 aaKnown RBP eCLIP43.13■■■■■ 4.49
UBE2D3-201ENST00000321805 BICRAQ9NZM4 1560 aa43.1■■■■■ 4.49
UBE2D3-201ENST00000321805 DNAJC5BQ9UF47 199 aa42.84■■■■■ 4.45
UBE2D3-201ENST00000321805 SHROOM4Q9ULL8 1493 aa42.79■■■■■ 4.44
UBE2D3-201ENST00000321805 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
UBE2D3-201ENST00000321805 EIF4G1Q04637 1599 aaKnown RBP42.02■■■■■ 4.32
UBE2D3-201ENST00000321805 CC2D2AQ9P2K1 1620 aa41.94■■■■■ 4.3
UBE2D3-201ENST00000321805 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
UBE2D3-201ENST00000321805 SMARCA4P51532 1647 aa40.93■■■■■ 4.14
UBE2D3-201ENST00000321805 NCAPD3P42695 1498 aa40.9■■■■■ 4.14
UBE2D3-201ENST00000321805 BAZ1AQ9NRL2 1556 aaPredicted RBP40.86■■■■■ 4.13
UBE2D3-201ENST00000321805 ATAD2BQ9ULI0 1458 aa40.82■■■■■ 4.12
UBE2D3-201ENST00000321805 SMARCA2P51531 1590 aa40.8■■■■■ 4.12
UBE2D3-201ENST00000321805 HMGXB3Q12766 1538 aa40.69■■■■■ 4.1
UBE2D3-201ENST00000321805 PEG3Q9GZU2 1588 aa40.61■■■■■ 4.09
UBE2D3-201ENST00000321805 MROH2BQ7Z745 1585 aa40.49■■■■■ 4.07
UBE2D3-201ENST00000321805 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
UBE2D3-201ENST00000321805 WIZO95785 1651 aa40.02■■■■■ 4
UBE2D3-201ENST00000321805 ERCC6Q03468 1493 aa40■■■■□ 3.99
UBE2D3-201ENST00000321805 NESP48681 1621 aa39.93■■■■□ 3.98
UBE2D3-201ENST00000321805 LAMC3Q9Y6N6 1575 aa39.92■■■■□ 3.98
UBE2D3-201ENST00000321805 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
UBE2D3-201ENST00000321805 CUX2O14529 1486 aa39.83■■■■□ 3.97
UBE2D3-201ENST00000321805 TOP2AP11388 1531 aaKnown RBP39.65■■■■□ 3.94
UBE2D3-201ENST00000321805 CADPSQ9ULU8 1353 aa39.65■■■■□ 3.94
UBE2D3-201ENST00000321805 PDS5BQ9NTI5 1447 aa39.64■■■■□ 3.94
UBE2D3-201ENST00000321805 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
UBE2D3-201ENST00000321805 KIF21AQ7Z4S6 1674 aa39.51■■■■□ 3.91
UBE2D3-201ENST00000321805 CFTRP13569 1480 aa39.34■■■■□ 3.89
UBE2D3-201ENST00000321805 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
UBE2D3-201ENST00000321805 CEP164Q9UPV0 1460 aa39.2■■■■□ 3.87
UBE2D3-201ENST00000321805 FANCD2Q9BXW9 1451 aa39.18■■■■□ 3.86
UBE2D3-201ENST00000321805 WDR62O43379 1518 aa39.15■■■■□ 3.86
UBE2D3-201ENST00000321805 CCDC88BA6NC98 1476 aa39.12■■■■□ 3.85
UBE2D3-201ENST00000321805 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
UBE2D3-201ENST00000321805 DNAJC5Q9H3Z4 198 aa39.04■■■■□ 3.84
UBE2D3-201ENST00000321805 URB2Q14146 1524 aaKnown RBP38.8■■■■□ 3.8
UBE2D3-201ENST00000321805 ABCC8Q09428 1581 aa38.57■■■■□ 3.76
UBE2D3-201ENST00000321805 TOPBP1Q92547 1522 aa38.51■■■■□ 3.76
UBE2D3-201ENST00000321805 DNMBPQ6XZF7 1577 aa38.46■■■■□ 3.75
UBE2D3-201ENST00000321805 IFT140Q96RY7 1462 aa38.41■■■■□ 3.74
UBE2D3-201ENST00000321805 SUPT5HO00267 1087 aaKnown RBP38.39■■■■□ 3.74
UBE2D3-201ENST00000321805 ZNF608Q9ULD9 1512 aaPredicted RBP38.19■■■■□ 3.7
UBE2D3-201ENST00000321805 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
UBE2D3-201ENST00000321805 TARBP1Q13395 1621 aaKnown RBP38.13■■■■□ 3.69
UBE2D3-201ENST00000321805 EIF4G3O43432 1585 aaKnown RBP38.09■■■■□ 3.69
UBE2D3-201ENST00000321805 CUX1P39880 1505 aa38.03■■■■□ 3.68
UBE2D3-201ENST00000321805 OSCARQ8IYS5 282 aa38■■■■□ 3.67
UBE2D3-201ENST00000321805 FGD5Q6ZNL6 1462 aa37.98■■■■□ 3.67
UBE2D3-201ENST00000321805 SOGA1O94964 1423 aa37.96■■■■□ 3.67
UBE2D3-201ENST00000321805 WDR97A6NE52 1622 aa37.94■■■■□ 3.66
UBE2D3-201ENST00000321805 RAD54L2Q9Y4B4 1467 aa37.92■■■■□ 3.66
UBE2D3-201ENST00000321805 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.662e-7■■■■□ 25.1
UBE2D3-201ENST00000321805 TDRD9Q8NDG6 1382 aaKnown RBP37.76■■■■□ 3.64
UBE2D3-201ENST00000321805 CHD1O14646 1710 aa37.67■■■■□ 3.62
UBE2D3-201ENST00000321805 BIVM-ERCC5R4GMW8 1640 aa37.65■■■■□ 3.62
UBE2D3-201ENST00000321805 WRNQ14191 1432 aaPredicted RBP eCLIP37.64■■■■□ 3.625e-6■■■■■ 29.2
UBE2D3-201ENST00000321805 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
UBE2D3-201ENST00000321805 TOP2BQ02880 1626 aa37.63■■■■□ 3.61
UBE2D3-201ENST00000321805 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
UBE2D3-201ENST00000321805 MAGI1Q96QZ7 1491 aaPredicted RBP37.6■■■■□ 3.61
UBE2D3-201ENST00000321805 SNAPC4Q5SXM2 1469 aa37.59■■■■□ 3.61
UBE2D3-201ENST00000321805 SYNJ1O43426 1573 aa37.55■■■■□ 3.6
UBE2D3-201ENST00000321805 GAPVD1Q14C86 1478 aa37.54■■■■□ 3.6
UBE2D3-201ENST00000321805 ABCA5Q8WWZ7 1642 aa37.53■■■■□ 3.6
UBE2D3-201ENST00000321805 PBRM1Q86U86 1689 aa37.5■■■■□ 3.59
UBE2D3-201ENST00000321805 FBLN2P98095 1184 aa37.49■■■■□ 3.59
UBE2D3-201ENST00000321805 RIMBP3CA6NJZ7 1639 aa37.47■■■■□ 3.59
UBE2D3-201ENST00000321805 RIMBP3BA6NNM3 1639 aa37.47■■■■□ 3.59
UBE2D3-201ENST00000321805 RIMBP3Q9UFD9 1639 aa37.47■■■■□ 3.59
UBE2D3-201ENST00000321805 TRIM41Q8WV44 630 aa37.45■■■■□ 3.59
UBE2D3-201ENST00000321805 SYNJ2O15056 1496 aa37.44■■■■□ 3.58
UBE2D3-201ENST00000321805 ARHGEF11O15085 1522 aa37.42■■■■□ 3.58
UBE2D3-201ENST00000321805 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.57
UBE2D3-201ENST00000321805 CLASP1Q7Z460 1538 aa37.3■■■■□ 3.56
UBE2D3-201ENST00000321805 ADAMTS12P58397 1594 aa37.21■■■■□ 3.55
UBE2D3-201ENST00000321805 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
UBE2D3-201ENST00000321805 GRIN2AQ12879 1464 aa37.13■■■■□ 3.54
UBE2D3-201ENST00000321805 FHAD1B1AJZ9 1412 aa37.11■■■■□ 3.53
UBE2D3-201ENST00000321805 ARAP1Q96P48 1450 aa37.07■■■■□ 3.53
UBE2D3-201ENST00000321805 NUP160Q12769 1436 aa37.01■■■■□ 3.51
UBE2D3-201ENST00000321805 CYB5RLQ6IPT4 315 aa37■■■■□ 3.51
UBE2D3-201ENST00000321805 CEP170Q5SW79 1584 aa36.94■■■■□ 3.5
UBE2D3-201ENST00000321805 KIF27Q86VH2 1401 aa36.91■■■■□ 3.5
UBE2D3-201ENST00000321805 SHROOM2Q13796 1616 aa36.79■■■■□ 3.48
UBE2D3-201ENST00000321805 CUL7Q14999 1698 aa36.79■■■■□ 3.48
UBE2D3-201ENST00000321805 IGF1RP08069 1367 aa36.76■■■■□ 3.47
UBE2D3-201ENST00000321805 RUSC2Q8N2Y8 1516 aa36.66■■■■□ 3.46
UBE2D3-201ENST00000321805 ERCC6L2Q5T890 1561 aa36.65■■■■□ 3.46
UBE2D3-201ENST00000321805 CARMIL1Q5VZK9 1371 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms