Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.28■■□□□ 1
RBFAQ8N0V3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.28■■□□□ 1
RBFAQ8N0V3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.28■■□□□ 1
RBFAQ8N0V3 AC080038.1-201ENST00000611274 1154 ntBASIC21.28■■□□□ 1
RBFAQ8N0V3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
RBFAQ8N0V3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.28■■□□□ 1
RBFAQ8N0V3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.28■■□□□ 1
RBFAQ8N0V3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.28■■□□□ 1
RBFAQ8N0V3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.28■■□□□ 1
RBFAQ8N0V3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
RBFAQ8N0V3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RBFAQ8N0V3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.27■■□□□ 1
RBFAQ8N0V3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
RBFAQ8N0V3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.27■■□□□ 1
RBFAQ8N0V3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.27■■□□□ 1
RBFAQ8N0V3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.27■■□□□ 1
RBFAQ8N0V3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.27■■□□□ 1
RBFAQ8N0V3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 AC005224.4-201ENST00000583262 1652 ntBASIC21.26■□□□□ 0.99
RBFAQ8N0V3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RBFAQ8N0V3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 KRT19P1-201ENST00000405746 1186 ntBASIC21.25■□□□□ 0.99
RBFAQ8N0V3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RBFAQ8N0V3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RBFAQ8N0V3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 AC073111.5-205ENST00000641717 521 ntBASIC21.23■□□□□ 0.99
RBFAQ8N0V3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RBFAQ8N0V3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 ID1-201ENST00000376105 1233 ntBASIC21.22■□□□□ 0.99
RBFAQ8N0V3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFAQ8N0V3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms