RNA–Protein interactions for RNA: ENST00000289963.12

PPP3CC-202, Transcript of protein phosphatase 3 catalytic subunit gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP3CC, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CC-202ENST00000289963 NISCHQ9Y2I1 1504 aa46.42■■■■■ 5.02
PPP3CC-202ENST00000289963 CCDC180Q9P1Z9 1646 aa40.17■■■■■ 4.02
PPP3CC-202ENST00000289963 ZCCHC6Q5VYS8 1495 aaKnown RBP39.04■■■■□ 3.84
PPP3CC-202ENST00000289963 SHROOM4Q9ULL8 1493 aa38.68■■■■□ 3.78
PPP3CC-202ENST00000289963 DCAF8L2P0C7V8 631 aa38.54■■■■□ 3.76
PPP3CC-202ENST00000289963 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
PPP3CC-202ENST00000289963 ABCC9O60706 1549 aa37.96■■■■□ 3.67
PPP3CC-202ENST00000289963 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
PPP3CC-202ENST00000289963 MYO15BQ96JP2 1530 aa37.64■■■■□ 3.62
PPP3CC-202ENST00000289963 NACADO15069 1562 aa37.4■■■■□ 3.58
PPP3CC-202ENST00000289963 SCRIBQ14160 1630 aa37.2■■■■□ 3.55
PPP3CC-202ENST00000289963 RB1CC1Q8TDY2 1594 aa37.02■■■■□ 3.52
PPP3CC-202ENST00000289963 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
PPP3CC-202ENST00000289963 UNC13AQ9UPW8 1703 aa36.32■■■■□ 3.4
PPP3CC-202ENST00000289963 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
PPP3CC-202ENST00000289963 CECR2Q9BXF3 1484 aa36.15■■■■□ 3.38
PPP3CC-202ENST00000289963 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.35
PPP3CC-202ENST00000289963 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
PPP3CC-202ENST00000289963 MROH2BQ7Z745 1585 aa35.94■■■■□ 3.34
PPP3CC-202ENST00000289963 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
PPP3CC-202ENST00000289963 WIZO95785 1651 aa35.67■■■■□ 3.3
PPP3CC-202ENST00000289963 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
PPP3CC-202ENST00000289963 LOC105371045A0A1W2PR82 267 aa35.42■■■■□ 3.26
PPP3CC-202ENST00000289963 TRIM41Q8WV44 630 aa35.28■■■■□ 3.24
PPP3CC-202ENST00000289963 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
PPP3CC-202ENST00000289963 PEG3Q9GZU2 1588 aa35.07■■■■□ 3.2
PPP3CC-202ENST00000289963 EIF4G1Q04637 1599 aaKnown RBP34.99■■■■□ 3.19
PPP3CC-202ENST00000289963 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
PPP3CC-202ENST00000289963 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
PPP3CC-202ENST00000289963 PCGF6Q9BYE7 350 aa34.94■■■■□ 3.18
PPP3CC-202ENST00000289963 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
PPP3CC-202ENST00000289963 FAM9AQ8IZU1 332 aaPredicted RBP34.84■■■■□ 3.17
PPP3CC-202ENST00000289963 BAZ1BQ9UIG0 1483 aaKnown RBP34.8■■■■□ 3.16
PPP3CC-202ENST00000289963 HRCP23327 699 aa34.79■■■■□ 3.16
PPP3CC-202ENST00000289963 NCAPD3P42695 1498 aa34.56■■■■□ 3.12
PPP3CC-202ENST00000289963 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
PPP3CC-202ENST00000289963 TRIM26Q12899 539 aaPredicted RBP34.52■■■■□ 3.12
PPP3CC-202ENST00000289963 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
PPP3CC-202ENST00000289963 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
PPP3CC-202ENST00000289963 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
PPP3CC-202ENST00000289963 SOGA1O94964 1423 aa34.12■■■■□ 3.05
PPP3CC-202ENST00000289963 WRNQ14191 1432 aaPredicted RBP eCLIP34.06■■■■□ 3.04
PPP3CC-202ENST00000289963 EEA1Q15075 1411 aa34.04■■■■□ 3.04
PPP3CC-202ENST00000289963 PPARGC1BQ86YN6 1023 aaKnown RBP33.99■■■■□ 3.03
PPP3CC-202ENST00000289963 RUSC2Q8N2Y8 1516 aa33.97■■■■□ 3.03
PPP3CC-202ENST00000289963 SYNJ1O43426 1573 aa33.92■■■■□ 3.02
PPP3CC-202ENST00000289963 CFTRP13569 1480 aa33.91■■■■□ 3.02
PPP3CC-202ENST00000289963 CSRNP3Q8WYN3 585 aa33.91■■■■□ 3.02
PPP3CC-202ENST00000289963 TNIKQ9UKE5 1360 aa33.84■■■■□ 3.01
PPP3CC-202ENST00000289963 CEP162Q5TB80 1403 aa33.8■■■■□ 3
PPP3CC-202ENST00000289963 CADPSQ9ULU8 1353 aa33.76■■■□□ 2.99
PPP3CC-202ENST00000289963 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
PPP3CC-202ENST00000289963 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
PPP3CC-202ENST00000289963 PRDM2Q13029 1718 aa33.64■■■□□ 2.98
PPP3CC-202ENST00000289963 UBTFP17480 764 aaKnown RBP33.62■■■□□ 2.97
PPP3CC-202ENST00000289963 ZEB1P37275 1124 aaPredicted RBP33.61■■■□□ 2.97
PPP3CC-202ENST00000289963 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
PPP3CC-202ENST00000289963 KIF21BO75037 1637 aa33.58■■■□□ 2.97
PPP3CC-202ENST00000289963 CEP164Q9UPV0 1460 aa33.58■■■□□ 2.97
PPP3CC-202ENST00000289963 CUX1P39880 1505 aa33.56■■■□□ 2.96
PPP3CC-202ENST00000289963 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
PPP3CC-202ENST00000289963 NESP48681 1621 aa33.44■■■□□ 2.94
PPP3CC-202ENST00000289963 FANCD2Q9BXW9 1451 aa33.4■■■□□ 2.94
PPP3CC-202ENST00000289963 RAPGEF2Q9Y4G8 1499 aa33.34■■■□□ 2.93
PPP3CC-202ENST00000289963 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
PPP3CC-202ENST00000289963 CLIP1P30622 1438 aa33.27■■■□□ 2.92
PPP3CC-202ENST00000289963 TTBK1Q5TCY1 1321 aaPredicted RBP33.23■■■□□ 2.91
PPP3CC-202ENST00000289963 PRXQ9BXM0 1461 aa33.16■■■□□ 2.9
PPP3CC-202ENST00000289963 FGD5Q6ZNL6 1462 aa33.15■■■□□ 2.9
PPP3CC-202ENST00000289963 KIF27Q86VH2 1401 aa33.15■■■□□ 2.9
PPP3CC-202ENST00000289963 ERICH3Q5RHP9 1530 aa33.13■■■□□ 2.89
PPP3CC-202ENST00000289963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.11■■■□□ 2.89
PPP3CC-202ENST00000289963 VPS8Q8N3P4 1428 aa33.11■■■□□ 2.89
PPP3CC-202ENST00000289963 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
PPP3CC-202ENST00000289963 PDS5BQ9NTI5 1447 aa33.09■■■□□ 2.89
PPP3CC-202ENST00000289963 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
PPP3CC-202ENST00000289963 CUX2O14529 1486 aa33.03■■■□□ 2.88
PPP3CC-202ENST00000289963 CCER1Q8TC90 406 aaPredicted RBP33.01■■■□□ 2.88
PPP3CC-202ENST00000289963 URB2Q14146 1524 aaKnown RBP32.96■■■□□ 2.87
PPP3CC-202ENST00000289963 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
PPP3CC-202ENST00000289963 KIF21AQ7Z4S6 1674 aa32.94■■■□□ 2.86
PPP3CC-202ENST00000289963 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
PPP3CC-202ENST00000289963 RANGAP1P46060 587 aaPredicted RBP32.9■■■□□ 2.86
PPP3CC-202ENST00000289963 IGF1RP08069 1367 aa32.86■■■□□ 2.85
PPP3CC-202ENST00000289963 ARAP1Q96P48 1450 aa32.83■■■□□ 2.85
PPP3CC-202ENST00000289963 ABCA10Q8WWZ4 1543 aa32.81■■■□□ 2.84
PPP3CC-202ENST00000289963 APLP2Q06481 763 aa32.79■■■□□ 2.84
PPP3CC-202ENST00000289963 CARMIL1Q5VZK9 1371 aa32.71■■■□□ 2.83
PPP3CC-202ENST00000289963 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
PPP3CC-202ENST00000289963 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
PPP3CC-202ENST00000289963 ARHGAP35Q9NRY4 1499 aa32.61■■■□□ 2.81
PPP3CC-202ENST00000289963 HNRNPUL2Q1KMD3 747 aaKnown RBP32.59■■■□□ 2.81
PPP3CC-202ENST00000289963 TDRD9Q8NDG6 1382 aaKnown RBP32.59■■■□□ 2.81
PPP3CC-202ENST00000289963 TARBP1Q13395 1621 aaKnown RBP32.5■■■□□ 2.79
PPP3CC-202ENST00000289963 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
PPP3CC-202ENST00000289963 KANK4Q5T7N3 995 aaPredicted RBP32.48■■■□□ 2.79
PPP3CC-202ENST00000289963 GAPVD1Q14C86 1478 aa32.48■■■□□ 2.79
PPP3CC-202ENST00000289963 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
PPP3CC-202ENST00000289963 CUL7Q14999 1698 aa32.45■■■□□ 2.79
PPP3CC-202ENST00000289963 WDR62O43379 1518 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms