RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 NISCHQ9Y2I1 1504 aa51.49■■■■■ 5.83
HMCES-203ENST00000417226 CCDC180Q9P1Z9 1646 aa45.67■■■■■ 4.9
HMCES-203ENST00000417226 ABCC9O60706 1549 aa44.36■■■■■ 4.69
HMCES-203ENST00000417226 ZCCHC6Q5VYS8 1495 aaKnown RBP42.99■■■■■ 4.47
HMCES-203ENST00000417226 DCAF8L2P0C7V8 631 aa42.88■■■■■ 4.46
HMCES-203ENST00000417226 NACADO15069 1562 aa42.82■■■■■ 4.45
HMCES-203ENST00000417226 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
HMCES-203ENST00000417226 MYO15BQ96JP2 1530 aa42.63■■■■■ 4.42
HMCES-203ENST00000417226 DCAF1Q9Y4B6 1507 aa42.59■■■■■ 4.41
HMCES-203ENST00000417226 UNC13AQ9UPW8 1703 aa41.93■■■■■ 4.3
HMCES-203ENST00000417226 SCRIBQ14160 1630 aa41.74■■■■■ 4.27
HMCES-203ENST00000417226 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
HMCES-203ENST00000417226 PABPN1Q86U42 306 aaKnown RBP eCLIP41.47■■■■■ 4.23
HMCES-203ENST00000417226 SHROOM4Q9ULL8 1493 aa41.05■■■■■ 4.16
HMCES-203ENST00000417226 EIF4G1Q04637 1599 aaKnown RBP40.39■■■■■ 4.06
HMCES-203ENST00000417226 DNAJC5BQ9UF47 199 aa40.33■■■■■ 4.05
HMCES-203ENST00000417226 CC2D2AQ9P2K1 1620 aa40.15■■■■■ 4.02
HMCES-203ENST00000417226 CECR2Q9BXF3 1484 aa40.09■■■■■ 4.01
HMCES-203ENST00000417226 SMARCA4P51532 1647 aa39.93■■■■□ 3.98
HMCES-203ENST00000417226 BAZ1AQ9NRL2 1556 aaPredicted RBP39.91■■■■□ 3.98
HMCES-203ENST00000417226 MROH2BQ7Z745 1585 aa39.71■■■■□ 3.95
HMCES-203ENST00000417226 ATAD2BQ9ULI0 1458 aa39.58■■■■□ 3.93
HMCES-203ENST00000417226 SMARCA2P51531 1590 aa39.56■■■■□ 3.92
HMCES-203ENST00000417226 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
HMCES-203ENST00000417226 NCAPD3P42695 1498 aa39.47■■■■□ 3.91
HMCES-203ENST00000417226 HMGXB3Q12766 1538 aa39.36■■■■□ 3.89
HMCES-203ENST00000417226 RSF1Q96T23 1441 aaPredicted RBP39.35■■■■□ 3.89
HMCES-203ENST00000417226 WIZO95785 1651 aa39.35■■■■□ 3.89
HMCES-203ENST00000417226 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
HMCES-203ENST00000417226 TOP2AP11388 1531 aaKnown RBP38.92■■■■□ 3.82
HMCES-203ENST00000417226 SUPT5HO00267 1087 aaKnown RBP38.64■■■■□ 3.78
HMCES-203ENST00000417226 NESP48681 1621 aa38.49■■■■□ 3.75
HMCES-203ENST00000417226 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
HMCES-203ENST00000417226 LAMC3Q9Y6N6 1575 aa38.42■■■■□ 3.74
HMCES-203ENST00000417226 CADPSQ9ULU8 1353 aa38.35■■■■□ 3.73
HMCES-203ENST00000417226 ERCC6Q03468 1493 aa38.21■■■■□ 3.71
HMCES-203ENST00000417226 CFTRP13569 1480 aa38.2■■■■□ 3.71
HMCES-203ENST00000417226 PDS5BQ9NTI5 1447 aa38.12■■■■□ 3.69
HMCES-203ENST00000417226 KIF21AQ7Z4S6 1674 aa38.1■■■■□ 3.69
HMCES-203ENST00000417226 PRDM2Q13029 1718 aa38.07■■■■□ 3.68
HMCES-203ENST00000417226 FANCD2Q9BXW9 1451 aa37.95■■■■□ 3.67
HMCES-203ENST00000417226 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
HMCES-203ENST00000417226 THOC2Q8NI27 1593 aaKnown RBP37.86■■■■□ 3.65
HMCES-203ENST00000417226 MRC2Q9UBG0 1479 aa37.74■■■■□ 3.63
HMCES-203ENST00000417226 CUX2O14529 1486 aa37.64■■■■□ 3.62
HMCES-203ENST00000417226 WDR62O43379 1518 aa37.62■■■■□ 3.61
HMCES-203ENST00000417226 URB2Q14146 1524 aaKnown RBP37.56■■■■□ 3.6
HMCES-203ENST00000417226 TOPBP1Q92547 1522 aa37.39■■■■□ 3.58
HMCES-203ENST00000417226 DNMBPQ6XZF7 1577 aa37.39■■■■□ 3.58
HMCES-203ENST00000417226 ABCC8Q09428 1581 aa37.35■■■■□ 3.57
HMCES-203ENST00000417226 CUX1P39880 1505 aa37.25■■■■□ 3.55
HMCES-203ENST00000417226 WRNQ14191 1432 aaPredicted RBP eCLIP37.11■■■■□ 3.53
HMCES-203ENST00000417226 POLA1P09884 1462 aaPredicted RBP37.09■■■■□ 3.53
HMCES-203ENST00000417226 FGD5Q6ZNL6 1462 aa37.06■■■■□ 3.52
HMCES-203ENST00000417226 SYNJ1O43426 1573 aa37.05■■■■□ 3.52
HMCES-203ENST00000417226 IFT140Q96RY7 1462 aa37.05■■■■□ 3.52
HMCES-203ENST00000417226 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
HMCES-203ENST00000417226 TOP2BQ02880 1626 aa37.02■■■■□ 3.52
HMCES-203ENST00000417226 TARBP1Q13395 1621 aaKnown RBP36.96■■■■□ 3.51
HMCES-203ENST00000417226 RAD54L2Q9Y4B4 1467 aa36.93■■■■□ 3.5
HMCES-203ENST00000417226 SOGA1O94964 1423 aa36.92■■■■□ 3.5
HMCES-203ENST00000417226 ZNF608Q9ULD9 1512 aaPredicted RBP36.88■■■■□ 3.49
HMCES-203ENST00000417226 EIF4G3O43432 1585 aaKnown RBP36.79■■■■□ 3.48
HMCES-203ENST00000417226 WDR97A6NE52 1622 aa36.79■■■■□ 3.48
HMCES-203ENST00000417226 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
HMCES-203ENST00000417226 AQRO60306 1485 aaKnown RBP eCLIP36.69■■■■□ 3.462e-6■■■■■ 26.8
HMCES-203ENST00000417226 TDRD9Q8NDG6 1382 aaKnown RBP36.68■■■■□ 3.46
HMCES-203ENST00000417226 ABCA5Q8WWZ7 1642 aa36.57■■■■□ 3.44
HMCES-203ENST00000417226 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
HMCES-203ENST00000417226 PBRM1Q86U86 1689 aa36.5■■■■□ 3.43
HMCES-203ENST00000417226 GRIN2BQ13224 1484 aa36.46■■■■□ 3.43
HMCES-203ENST00000417226 TRIM41Q8WV44 630 aa36.45■■■■□ 3.43
HMCES-203ENST00000417226 SNAPC4Q5SXM2 1469 aa36.4■■■■□ 3.42
HMCES-203ENST00000417226 MAGI1Q96QZ7 1491 aaPredicted RBP36.34■■■■□ 3.41
HMCES-203ENST00000417226 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
HMCES-203ENST00000417226 CHD1O14646 1710 aa36.28■■■■□ 3.4
HMCES-203ENST00000417226 ERICH3Q5RHP9 1530 aa36.27■■■■□ 3.4
HMCES-203ENST00000417226 CHIC1Q5VXU3 224 aa36.22■■■■□ 3.39
HMCES-203ENST00000417226 FBLN2P98095 1184 aa36.2■■■■□ 3.39
HMCES-203ENST00000417226 ADAMTS12P58397 1594 aa36.2■■■■□ 3.39
HMCES-203ENST00000417226 SYNJ2O15056 1496 aa36.19■■■■□ 3.38
HMCES-203ENST00000417226 CHMP7Q8WUX9 453 aaPredicted RBP36.11■■■■□ 3.37
HMCES-203ENST00000417226 RUSC2Q8N2Y8 1516 aa36.1■■■■□ 3.37
HMCES-203ENST00000417226 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
HMCES-203ENST00000417226 FHAD1B1AJZ9 1412 aa36.09■■■■□ 3.37
HMCES-203ENST00000417226 IGF1RP08069 1367 aa36.08■■■■□ 3.37
HMCES-203ENST00000417226 CUL7Q14999 1698 aa36.05■■■■□ 3.36
HMCES-203ENST00000417226 DNAJC5Q9H3Z4 198 aa36.03■■■■□ 3.36
HMCES-203ENST00000417226 GRIN2AQ12879 1464 aa36.01■■■■□ 3.35
HMCES-203ENST00000417226 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
HMCES-203ENST00000417226 CEP170Q5SW79 1584 aa35.84■■■■□ 3.33
HMCES-203ENST00000417226 CLASP1Q7Z460 1538 aa35.84■■■■□ 3.33
HMCES-203ENST00000417226 NUP160Q12769 1436 aa35.81■■■■□ 3.32
HMCES-203ENST00000417226 EEA1Q15075 1411 aa35.81■■■■□ 3.32
HMCES-203ENST00000417226 RAPGEF2Q9Y4G8 1499 aa35.73■■■■□ 3.31
HMCES-203ENST00000417226 FAM9AQ8IZU1 332 aaPredicted RBP35.73■■■■□ 3.31
HMCES-203ENST00000417226 CSRNP3Q8WYN3 585 aa35.7■■■■□ 3.31
HMCES-203ENST00000417226 PRXQ9BXM0 1461 aa35.69■■■■□ 3.3
HMCES-203ENST00000417226 ARHGEF11O15085 1522 aa35.59■■■■□ 3.29
HMCES-203ENST00000417226 RIMBP3CA6NJZ7 1639 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms