RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 NISCHQ9Y2I1 1504 aa51.48■■■■■ 5.83
SDR39U1-208ENST00000554698 CCDC180Q9P1Z9 1646 aa45.55■■■■■ 4.88
SDR39U1-208ENST00000554698 ABCC9O60706 1549 aa44.22■■■■■ 4.67
SDR39U1-208ENST00000554698 ZCCHC6Q5VYS8 1495 aaKnown RBP42.97■■■■■ 4.47
SDR39U1-208ENST00000554698 DCAF8L2P0C7V8 631 aa42.78■■■■■ 4.44
SDR39U1-208ENST00000554698 NACADO15069 1562 aa42.77■■■■■ 4.44
SDR39U1-208ENST00000554698 RB1CC1Q8TDY2 1594 aa42.7■■■■■ 4.43
SDR39U1-208ENST00000554698 MYO15BQ96JP2 1530 aa42.69■■■■■ 4.43
SDR39U1-208ENST00000554698 DCAF1Q9Y4B6 1507 aa42.64■■■■■ 4.42
SDR39U1-208ENST00000554698 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
SDR39U1-208ENST00000554698 SCRIBQ14160 1630 aa41.59■■■■■ 4.25
SDR39U1-208ENST00000554698 BICRAQ9NZM4 1560 aa41.43■■■■■ 4.22
SDR39U1-208ENST00000554698 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.222e-8■□□□□ 11.2
SDR39U1-208ENST00000554698 SHROOM4Q9ULL8 1493 aa41.06■■■■■ 4.16
SDR39U1-208ENST00000554698 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
SDR39U1-208ENST00000554698 DNAJC5BQ9UF47 199 aa40.28■■■■■ 4.04
SDR39U1-208ENST00000554698 CECR2Q9BXF3 1484 aa40.06■■■■■ 4
SDR39U1-208ENST00000554698 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
SDR39U1-208ENST00000554698 BAZ1AQ9NRL2 1556 aaPredicted RBP39.87■■■■□ 3.97
SDR39U1-208ENST00000554698 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
SDR39U1-208ENST00000554698 MROH2BQ7Z745 1585 aa39.67■■■■□ 3.94
SDR39U1-208ENST00000554698 ATAD2BQ9ULI0 1458 aa39.56■■■■□ 3.92
SDR39U1-208ENST00000554698 SMARCA2P51531 1590 aa39.51■■■■□ 3.91
SDR39U1-208ENST00000554698 NCAPD3P42695 1498 aa39.5■■■■□ 3.91
SDR39U1-208ENST00000554698 PEG3Q9GZU2 1588 aa39.48■■■■□ 3.91
SDR39U1-208ENST00000554698 RSF1Q96T23 1441 aaPredicted RBP39.38■■■■□ 3.9
SDR39U1-208ENST00000554698 HMGXB3Q12766 1538 aa39.31■■■■□ 3.88
SDR39U1-208ENST00000554698 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
SDR39U1-208ENST00000554698 WIZO95785 1651 aa39.22■■■■□ 3.87
SDR39U1-208ENST00000554698 TOP2AP11388 1531 aaKnown RBP38.87■■■■□ 3.81
SDR39U1-208ENST00000554698 SUPT5HO00267 1087 aaKnown RBP38.6■■■■□ 3.77
SDR39U1-208ENST00000554698 CCDC88BA6NC98 1476 aa38.42■■■■□ 3.74
SDR39U1-208ENST00000554698 NESP48681 1621 aa38.39■■■■□ 3.74
SDR39U1-208ENST00000554698 CADPSQ9ULU8 1353 aa38.36■■■■□ 3.73
SDR39U1-208ENST00000554698 LAMC3Q9Y6N6 1575 aa38.35■■■■□ 3.73
SDR39U1-208ENST00000554698 CFTRP13569 1480 aa38.22■■■■□ 3.71
SDR39U1-208ENST00000554698 PDS5BQ9NTI5 1447 aa38.1■■■■□ 3.69
SDR39U1-208ENST00000554698 ERCC6Q03468 1493 aa38.07■■■■□ 3.69
SDR39U1-208ENST00000554698 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
SDR39U1-208ENST00000554698 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
SDR39U1-208ENST00000554698 PRDM2Q13029 1718 aa37.83■■■■□ 3.65
SDR39U1-208ENST00000554698 CEP164Q9UPV0 1460 aa37.8■■■■□ 3.64
SDR39U1-208ENST00000554698 THOC2Q8NI27 1593 aaKnown RBP37.72■■■■□ 3.63
SDR39U1-208ENST00000554698 MRC2Q9UBG0 1479 aa37.68■■■■□ 3.62
SDR39U1-208ENST00000554698 CUX2O14529 1486 aa37.57■■■■□ 3.6
SDR39U1-208ENST00000554698 WDR62O43379 1518 aa37.55■■■■□ 3.6
SDR39U1-208ENST00000554698 URB2Q14146 1524 aaKnown RBP37.5■■■■□ 3.59
SDR39U1-208ENST00000554698 ABCC8Q09428 1581 aa37.35■■■■□ 3.57
SDR39U1-208ENST00000554698 TOPBP1Q92547 1522 aa37.34■■■■□ 3.57
SDR39U1-208ENST00000554698 DNMBPQ6XZF7 1577 aa37.31■■■■□ 3.56
SDR39U1-208ENST00000554698 CUX1P39880 1505 aa37.2■■■■□ 3.55
SDR39U1-208ENST00000554698 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
SDR39U1-208ENST00000554698 POLA1P09884 1462 aaPredicted RBP37.05■■■■□ 3.52
SDR39U1-208ENST00000554698 IFT140Q96RY7 1462 aa37.02■■■■□ 3.52
SDR39U1-208ENST00000554698 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.51
SDR39U1-208ENST00000554698 SYNJ1O43426 1573 aa36.98■■■■□ 3.51
SDR39U1-208ENST00000554698 TOP2BQ02880 1626 aa36.97■■■■□ 3.51
SDR39U1-208ENST00000554698 BIVM-ERCC5R4GMW8 1640 aa36.95■■■■□ 3.5
SDR39U1-208ENST00000554698 SOGA1O94964 1423 aa36.9■■■■□ 3.5
SDR39U1-208ENST00000554698 TARBP1Q13395 1621 aaKnown RBP36.89■■■■□ 3.5
SDR39U1-208ENST00000554698 RAD54L2Q9Y4B4 1467 aa36.87■■■■□ 3.49
SDR39U1-208ENST00000554698 ZNF608Q9ULD9 1512 aaPredicted RBP36.8■■■■□ 3.48
SDR39U1-208ENST00000554698 ABCA10Q8WWZ4 1543 aa36.69■■■■□ 3.46
SDR39U1-208ENST00000554698 WDR97A6NE52 1622 aa36.65■■■■□ 3.46
SDR39U1-208ENST00000554698 EIF4G3O43432 1585 aaKnown RBP36.65■■■■□ 3.46
SDR39U1-208ENST00000554698 AQRO60306 1485 aaKnown RBP eCLIP36.65■■■■□ 3.46
SDR39U1-208ENST00000554698 TDRD9Q8NDG6 1382 aaKnown RBP36.65■■■■□ 3.46
SDR39U1-208ENST00000554698 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
SDR39U1-208ENST00000554698 GAPVD1Q14C86 1478 aa36.48■■■■□ 3.43
SDR39U1-208ENST00000554698 TRIM41Q8WV44 630 aa36.47■■■■□ 3.43
SDR39U1-208ENST00000554698 GRIN2BQ13224 1484 aa36.43■■■■□ 3.42
SDR39U1-208ENST00000554698 SNAPC4Q5SXM2 1469 aa36.31■■■■□ 3.4
SDR39U1-208ENST00000554698 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
SDR39U1-208ENST00000554698 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
SDR39U1-208ENST00000554698 MAGI1Q96QZ7 1491 aaPredicted RBP36.29■■■■□ 3.4
SDR39U1-208ENST00000554698 CHIC1Q5VXU3 224 aa36.29■■■■□ 3.4
SDR39U1-208ENST00000554698 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
SDR39U1-208ENST00000554698 SYNJ2O15056 1496 aa36.15■■■■□ 3.38
SDR39U1-208ENST00000554698 IGF1RP08069 1367 aa36.13■■■■□ 3.37
SDR39U1-208ENST00000554698 ADAMTS12P58397 1594 aa36.11■■■■□ 3.37
SDR39U1-208ENST00000554698 FBLN2P98095 1184 aa36.09■■■■□ 3.37
SDR39U1-208ENST00000554698 FHAD1B1AJZ9 1412 aa36.08■■■■□ 3.37
SDR39U1-208ENST00000554698 OSCARQ8IYS5 282 aa36.08■■■■□ 3.37
SDR39U1-208ENST00000554698 RUSC2Q8N2Y8 1516 aa36.07■■■■□ 3.37
SDR39U1-208ENST00000554698 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.36
SDR39U1-208ENST00000554698 CHD1O14646 1710 aa36.06■■■■□ 3.36
SDR39U1-208ENST00000554698 DNAJC5Q9H3Z4 198 aa35.98■■■■□ 3.35
SDR39U1-208ENST00000554698 GRIN2AQ12879 1464 aa35.96■■■■□ 3.35
SDR39U1-208ENST00000554698 CUL7Q14999 1698 aa35.95■■■■□ 3.35
SDR39U1-208ENST00000554698 CARMIL1Q5VZK9 1371 aa35.9■■■■□ 3.34
SDR39U1-208ENST00000554698 EEA1Q15075 1411 aa35.87■■■■□ 3.33
SDR39U1-208ENST00000554698 NUP160Q12769 1436 aa35.81■■■■□ 3.32
SDR39U1-208ENST00000554698 CLASP1Q7Z460 1538 aa35.77■■■■□ 3.32
SDR39U1-208ENST00000554698 CSRNP3Q8WYN3 585 aa35.76■■■■□ 3.31
SDR39U1-208ENST00000554698 CEP170Q5SW79 1584 aa35.75■■■■□ 3.31
SDR39U1-208ENST00000554698 PRXQ9BXM0 1461 aa35.72■■■■□ 3.31
SDR39U1-208ENST00000554698 RAPGEF2Q9Y4G8 1499 aa35.72■■■■□ 3.31
SDR39U1-208ENST00000554698 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
SDR39U1-208ENST00000554698 KIAA0586Q9BVV6 1533 aa35.55■■■■□ 3.28
SDR39U1-208ENST00000554698 ARHGEF11O15085 1522 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms