RNA–Protein interactions for RNA: ENST00000519533.1

CHRAC1-203, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CHRAC1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-203ENST00000519533 NISCHQ9Y2I1 1504 aa48.74■■■■■ 5.39
CHRAC1-203ENST00000519533 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
CHRAC1-203ENST00000519533 ZCCHC6Q5VYS8 1495 aaKnown RBP40.93■■■■■ 4.14
CHRAC1-203ENST00000519533 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
CHRAC1-203ENST00000519533 ABCC9O60706 1549 aa40.33■■■■■ 4.05
CHRAC1-203ENST00000519533 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
CHRAC1-203ENST00000519533 MYO15BQ96JP2 1530 aa39.97■■■■□ 3.99
CHRAC1-203ENST00000519533 NACADO15069 1562 aa39.76■■■■□ 3.96
CHRAC1-203ENST00000519533 SHROOM4Q9ULL8 1493 aa39.52■■■■□ 3.92
CHRAC1-203ENST00000519533 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
CHRAC1-203ENST00000519533 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
CHRAC1-203ENST00000519533 UNC13AQ9UPW8 1703 aa38.65■■■■□ 3.78
CHRAC1-203ENST00000519533 BICRAQ9NZM4 1560 aa38.16■■■■□ 3.7
CHRAC1-203ENST00000519533 SUPT5HO00267 1087 aaKnown RBP37.99■■■■□ 3.67
CHRAC1-203ENST00000519533 PABPN1Q86U42 306 aaKnown RBP eCLIP37.92■■■■□ 3.66
CHRAC1-203ENST00000519533 CECR2Q9BXF3 1484 aa37.79■■■■□ 3.64
CHRAC1-203ENST00000519533 BAZ1AQ9NRL2 1556 aaPredicted RBP37.71■■■■□ 3.63
CHRAC1-203ENST00000519533 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.63
CHRAC1-203ENST00000519533 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
CHRAC1-203ENST00000519533 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
CHRAC1-203ENST00000519533 WIZO95785 1651 aa37.32■■■■□ 3.56
CHRAC1-203ENST00000519533 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
CHRAC1-203ENST00000519533 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
CHRAC1-203ENST00000519533 TOP2AP11388 1531 aaKnown RBP36.98■■■■□ 3.51
CHRAC1-203ENST00000519533 SMARCA2P51531 1590 aa36.97■■■■□ 3.51
CHRAC1-203ENST00000519533 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
CHRAC1-203ENST00000519533 BAZ1BQ9UIG0 1483 aaKnown RBP36.74■■■■□ 3.47
CHRAC1-203ENST00000519533 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
CHRAC1-203ENST00000519533 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
CHRAC1-203ENST00000519533 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
CHRAC1-203ENST00000519533 CCDC88BA6NC98 1476 aa36.52■■■■□ 3.44
CHRAC1-203ENST00000519533 CHIC1Q5VXU3 224 aa36.29■■■■□ 3.4
CHRAC1-203ENST00000519533 TRIM41Q8WV44 630 aa35.8■■■■□ 3.32
CHRAC1-203ENST00000519533 CFTRP13569 1480 aa35.77■■■■□ 3.32
CHRAC1-203ENST00000519533 PRDM2Q13029 1718 aa35.75■■■■□ 3.31
CHRAC1-203ENST00000519533 ABCC8Q09428 1581 aa35.7■■■■□ 3.31
CHRAC1-203ENST00000519533 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
CHRAC1-203ENST00000519533 WRNQ14191 1432 aaPredicted RBP eCLIP35.55■■■■□ 3.28
CHRAC1-203ENST00000519533 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
CHRAC1-203ENST00000519533 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
CHRAC1-203ENST00000519533 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
CHRAC1-203ENST00000519533 NESP48681 1621 aa35.33■■■■□ 3.25
CHRAC1-203ENST00000519533 TOP2BQ02880 1626 aa35.31■■■■□ 3.24
CHRAC1-203ENST00000519533 BIVM-ERCC5R4GMW8 1640 aa35.3■■■■□ 3.24
CHRAC1-203ENST00000519533 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
CHRAC1-203ENST00000519533 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
CHRAC1-203ENST00000519533 CUX1P39880 1505 aa35.18■■■■□ 3.22
CHRAC1-203ENST00000519533 CEP164Q9UPV0 1460 aa35.12■■■■□ 3.21
CHRAC1-203ENST00000519533 EEA1Q15075 1411 aa35.05■■■■□ 3.2
CHRAC1-203ENST00000519533 FAM9AQ8IZU1 332 aaPredicted RBP35.05■■■■□ 3.2
CHRAC1-203ENST00000519533 KIF21AQ7Z4S6 1674 aa35.03■■■■□ 3.2
CHRAC1-203ENST00000519533 DNMBPQ6XZF7 1577 aa34.99■■■■□ 3.19
CHRAC1-203ENST00000519533 SOGA1O94964 1423 aa34.97■■■■□ 3.19
CHRAC1-203ENST00000519533 TOPBP1Q92547 1522 aa34.89■■■■□ 3.18
CHRAC1-203ENST00000519533 FGD5Q6ZNL6 1462 aa34.85■■■■□ 3.17
CHRAC1-203ENST00000519533 LOC105371045A0A1W2PR82 267 aa34.82■■■■□ 3.17
CHRAC1-203ENST00000519533 URB2Q14146 1524 aaKnown RBP34.81■■■■□ 3.16
CHRAC1-203ENST00000519533 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
CHRAC1-203ENST00000519533 CSRNP3Q8WYN3 585 aa34.76■■■■□ 3.15
CHRAC1-203ENST00000519533 MRC2Q9UBG0 1479 aa34.72■■■■□ 3.15
CHRAC1-203ENST00000519533 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.14
CHRAC1-203ENST00000519533 KIF27Q86VH2 1401 aa34.69■■■■□ 3.14
CHRAC1-203ENST00000519533 ERCC6Q03468 1493 aa34.68■■■■□ 3.14
CHRAC1-203ENST00000519533 CUX2O14529 1486 aa34.59■■■■□ 3.13
CHRAC1-203ENST00000519533 KIF21BO75037 1637 aa34.57■■■■□ 3.13
CHRAC1-203ENST00000519533 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
CHRAC1-203ENST00000519533 WDR62O43379 1518 aa34.55■■■■□ 3.12
CHRAC1-203ENST00000519533 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
CHRAC1-203ENST00000519533 GOLGA3Q08378 1498 aa34.5■■■■□ 3.11
CHRAC1-203ENST00000519533 WDR97A6NE52 1622 aa34.5■■■■□ 3.11
CHRAC1-203ENST00000519533 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
CHRAC1-203ENST00000519533 THOC2Q8NI27 1593 aaKnown RBP34.47■■■■□ 3.11
CHRAC1-203ENST00000519533 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
CHRAC1-203ENST00000519533 ERICH3Q5RHP9 1530 aa34.38■■■■□ 3.09
CHRAC1-203ENST00000519533 PRXQ9BXM0 1461 aa34.37■■■■□ 3.09
CHRAC1-203ENST00000519533 TNIKQ9UKE5 1360 aa34.34■■■■□ 3.09
CHRAC1-203ENST00000519533 UBTFP17480 764 aaKnown RBP34.31■■■■□ 3.08
CHRAC1-203ENST00000519533 ABCA5Q8WWZ7 1642 aa34.31■■■■□ 3.08
CHRAC1-203ENST00000519533 IGF1RP08069 1367 aa34.3■■■■□ 3.08
CHRAC1-203ENST00000519533 RAPGEF2Q9Y4G8 1499 aa34.29■■■■□ 3.08
CHRAC1-203ENST00000519533 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
CHRAC1-203ENST00000519533 CUL7Q14999 1698 aa34.23■■■■□ 3.07
CHRAC1-203ENST00000519533 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
CHRAC1-203ENST00000519533 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
CHRAC1-203ENST00000519533 CARMIL1Q5VZK9 1371 aa34.18■■■■□ 3.06
CHRAC1-203ENST00000519533 CEP162Q5TB80 1403 aa34.12■■■■□ 3.05
CHRAC1-203ENST00000519533 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
CHRAC1-203ENST00000519533 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.04
CHRAC1-203ENST00000519533 GRIN2BQ13224 1484 aa34■■■■□ 3.03
CHRAC1-203ENST00000519533 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
CHRAC1-203ENST00000519533 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
CHRAC1-203ENST00000519533 CLIP1P30622 1438 aa33.92■■■■□ 3.02
CHRAC1-203ENST00000519533 ADAMTS12P58397 1594 aa33.87■■■■□ 3.01
CHRAC1-203ENST00000519533 FHAD1B1AJZ9 1412 aa33.86■■■■□ 3.01
CHRAC1-203ENST00000519533 CTTNBP2Q8WZ74 1663 aa33.83■■■■□ 3.01
CHRAC1-203ENST00000519533 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
CHRAC1-203ENST00000519533 SNAPC4Q5SXM2 1469 aa33.75■■■□□ 2.99
CHRAC1-203ENST00000519533 RANGAP1P46060 587 aaPredicted RBP33.7■■■□□ 2.99
CHRAC1-203ENST00000519533 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
CHRAC1-203ENST00000519533 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms