RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 NISCHQ9Y2I1 1504 aa49.97■■■■■ 5.59
PTP4A3-203ENST00000520105 CCDC180Q9P1Z9 1646 aa43.8■■■■■ 4.6
PTP4A3-203ENST00000520105 ABCC9O60706 1549 aa42.07■■■■■ 4.32
PTP4A3-203ENST00000520105 ZCCHC6Q5VYS8 1495 aaKnown RBP41.83■■■■■ 4.29
PTP4A3-203ENST00000520105 DCAF8L2P0C7V8 631 aa41.59■■■■■ 4.25
PTP4A3-203ENST00000520105 DCAF1Q9Y4B6 1507 aa41.27■■■■■ 4.2
PTP4A3-203ENST00000520105 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.16
PTP4A3-203ENST00000520105 NACADO15069 1562 aa40.97■■■■■ 4.15
PTP4A3-203ENST00000520105 RB1CC1Q8TDY2 1594 aa40.77■■■■■ 4.12
PTP4A3-203ENST00000520105 SHROOM4Q9ULL8 1493 aa40.4■■■■■ 4.06
PTP4A3-203ENST00000520105 SCRIBQ14160 1630 aa40.26■■■■■ 4.03
PTP4A3-203ENST00000520105 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
PTP4A3-203ENST00000520105 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.93
PTP4A3-203ENST00000520105 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
PTP4A3-203ENST00000520105 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
PTP4A3-203ENST00000520105 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
PTP4A3-203ENST00000520105 MROH2BQ7Z745 1585 aa38.6■■■■□ 3.77
PTP4A3-203ENST00000520105 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
PTP4A3-203ENST00000520105 RSF1Q96T23 1441 aaPredicted RBP38.56■■■■□ 3.76
PTP4A3-203ENST00000520105 SMARCA4P51532 1647 aa38.53■■■■□ 3.76
PTP4A3-203ENST00000520105 EIF4G1Q04637 1599 aaKnown RBP38.43■■■■□ 3.74
PTP4A3-203ENST00000520105 WIZO95785 1651 aa38.25■■■■□ 3.71
PTP4A3-203ENST00000520105 ATAD2BQ9ULI0 1458 aa38.07■■■■□ 3.69
PTP4A3-203ENST00000520105 PEG3Q9GZU2 1588 aa38.07■■■■□ 3.68
PTP4A3-203ENST00000520105 CC2D2AQ9P2K1 1620 aa38.03■■■■□ 3.68
PTP4A3-203ENST00000520105 SMARCA2P51531 1590 aa38■■■■□ 3.67
PTP4A3-203ENST00000520105 NCAPD3P42695 1498 aa37.85■■■■□ 3.65
PTP4A3-203ENST00000520105 BAZ1BQ9UIG0 1483 aaKnown RBP37.81■■■■□ 3.64
PTP4A3-203ENST00000520105 TOP2AP11388 1531 aaKnown RBP37.8■■■■□ 3.64
PTP4A3-203ENST00000520105 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
PTP4A3-203ENST00000520105 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
PTP4A3-203ENST00000520105 CCDC88BA6NC98 1476 aa37.45■■■■□ 3.59
PTP4A3-203ENST00000520105 CADPSQ9ULU8 1353 aa36.85■■■■□ 3.49
PTP4A3-203ENST00000520105 CFTRP13569 1480 aa36.83■■■■□ 3.49
PTP4A3-203ENST00000520105 NESP48681 1621 aa36.75■■■■□ 3.47
PTP4A3-203ENST00000520105 LAMC3Q9Y6N6 1575 aa36.63■■■■□ 3.46
PTP4A3-203ENST00000520105 CHIC1Q5VXU3 224 aa36.59■■■■□ 3.45
PTP4A3-203ENST00000520105 PRDM2Q13029 1718 aa36.55■■■■□ 3.44
PTP4A3-203ENST00000520105 ABCC8Q09428 1581 aa36.47■■■■□ 3.43
PTP4A3-203ENST00000520105 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
PTP4A3-203ENST00000520105 PDS5BQ9NTI5 1447 aa36.4■■■■□ 3.42
PTP4A3-203ENST00000520105 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
PTP4A3-203ENST00000520105 WRNQ14191 1432 aaPredicted RBP eCLIP36.29■■■■□ 3.48e-7■■■■■ 36.5
PTP4A3-203ENST00000520105 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
PTP4A3-203ENST00000520105 CEP164Q9UPV0 1460 aa36.25■■■■□ 3.39
PTP4A3-203ENST00000520105 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
PTP4A3-203ENST00000520105 CUX1P39880 1505 aa36.12■■■■□ 3.37
PTP4A3-203ENST00000520105 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
PTP4A3-203ENST00000520105 TOP2BQ02880 1626 aa36.05■■■■□ 3.36
PTP4A3-203ENST00000520105 URB2Q14146 1524 aaKnown RBP36.02■■■■□ 3.36
PTP4A3-203ENST00000520105 BIVM-ERCC5R4GMW8 1640 aa36■■■■□ 3.35
PTP4A3-203ENST00000520105 TOPBP1Q92547 1522 aa35.96■■■■□ 3.35
PTP4A3-203ENST00000520105 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
PTP4A3-203ENST00000520105 MRC2Q9UBG0 1479 aa35.95■■■■□ 3.35
PTP4A3-203ENST00000520105 FGD5Q6ZNL6 1462 aa35.83■■■■□ 3.33
PTP4A3-203ENST00000520105 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
PTP4A3-203ENST00000520105 WDR62O43379 1518 aa35.77■■■■□ 3.32
PTP4A3-203ENST00000520105 POLA1P09884 1462 aaPredicted RBP35.74■■■■□ 3.31
PTP4A3-203ENST00000520105 SOGA1O94964 1423 aa35.67■■■■□ 3.3
PTP4A3-203ENST00000520105 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
PTP4A3-203ENST00000520105 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
PTP4A3-203ENST00000520105 RUSC2Q8N2Y8 1516 aa35.59■■■■□ 3.29
PTP4A3-203ENST00000520105 CUX2O14529 1486 aa35.56■■■■□ 3.28
PTP4A3-203ENST00000520105 ABCA10Q8WWZ4 1543 aa35.48■■■■□ 3.27
PTP4A3-203ENST00000520105 TARBP1Q13395 1621 aaKnown RBP35.46■■■■□ 3.27
PTP4A3-203ENST00000520105 KIF27Q86VH2 1401 aa35.43■■■■□ 3.26
PTP4A3-203ENST00000520105 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
PTP4A3-203ENST00000520105 EEA1Q15075 1411 aa35.4■■■■□ 3.26
PTP4A3-203ENST00000520105 WDR97A6NE52 1622 aa35.39■■■■□ 3.26
PTP4A3-203ENST00000520105 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
PTP4A3-203ENST00000520105 CSRNP3Q8WYN3 585 aa35.36■■■■□ 3.25
PTP4A3-203ENST00000520105 ZNF608Q9ULD9 1512 aaPredicted RBP35.29■■■■□ 3.24
PTP4A3-203ENST00000520105 AQRO60306 1485 aaKnown RBP eCLIP35.26■■■■□ 3.234e-7■■■■□ 23.2
PTP4A3-203ENST00000520105 GAPVD1Q14C86 1478 aa35.23■■■■□ 3.23
PTP4A3-203ENST00000520105 ABCA5Q8WWZ7 1642 aa35.22■■■■□ 3.23
PTP4A3-203ENST00000520105 LOC105371045A0A1W2PR82 267 aa35.22■■■■□ 3.23
PTP4A3-203ENST00000520105 EHMT2Q96KQ7 1210 aa35.21■■■■□ 3.23
PTP4A3-203ENST00000520105 IGF1RP08069 1367 aa35.21■■■■□ 3.23
PTP4A3-203ENST00000520105 EIF4G3O43432 1585 aaKnown RBP35.1■■■■□ 3.21
PTP4A3-203ENST00000520105 ERICH3Q5RHP9 1530 aa35.04■■■■□ 3.2
PTP4A3-203ENST00000520105 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
PTP4A3-203ENST00000520105 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
PTP4A3-203ENST00000520105 PRXQ9BXM0 1461 aa35.03■■■■□ 3.2
PTP4A3-203ENST00000520105 CARMIL1Q5VZK9 1371 aa35.02■■■■□ 3.2
PTP4A3-203ENST00000520105 KIF21BO75037 1637 aa34.97■■■■□ 3.19
PTP4A3-203ENST00000520105 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
PTP4A3-203ENST00000520105 CUL7Q14999 1698 aa34.92■■■■□ 3.18
PTP4A3-203ENST00000520105 GOLGA3Q08378 1498 aa34.91■■■■□ 3.18
PTP4A3-203ENST00000520105 SNAPC4Q5SXM2 1469 aa34.88■■■■□ 3.17
PTP4A3-203ENST00000520105 UBTFP17480 764 aaKnown RBP34.87■■■■□ 3.17
PTP4A3-203ENST00000520105 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
PTP4A3-203ENST00000520105 ADAMTS12P58397 1594 aa34.81■■■■□ 3.16
PTP4A3-203ENST00000520105 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
PTP4A3-203ENST00000520105 TNIKQ9UKE5 1360 aa34.7■■■■□ 3.15
PTP4A3-203ENST00000520105 FBLN2P98095 1184 aa34.69■■■■□ 3.14
PTP4A3-203ENST00000520105 CHMP7Q8WUX9 453 aaPredicted RBP34.69■■■■□ 3.14
PTP4A3-203ENST00000520105 SYNJ2O15056 1496 aa34.67■■■■□ 3.14
PTP4A3-203ENST00000520105 GRIN2AQ12879 1464 aa34.6■■■■□ 3.13
PTP4A3-203ENST00000520105 RANGAP1P46060 587 aaPredicted RBP34.53■■■■□ 3.12
PTP4A3-203ENST00000520105 CHD1O14646 1710 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms