RNA–Protein interactions for RNA: ENST00000471387.6

YIF1A-205, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 5 BASIC

Gene YIF1A, Length 854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-205ENST00000471387 NISCHQ9Y2I1 1504 aa52.35■■■■■ 5.97
YIF1A-205ENST00000471387 CCDC180Q9P1Z9 1646 aa46.8■■■■■ 5.08
YIF1A-205ENST00000471387 ABCC9O60706 1549 aa46.63■■■■■ 5.05
YIF1A-205ENST00000471387 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
YIF1A-205ENST00000471387 NACADO15069 1562 aa44.18■■■■■ 4.66
YIF1A-205ENST00000471387 DCAF8L2P0C7V8 631 aa44.11■■■■■ 4.65
YIF1A-205ENST00000471387 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.57
YIF1A-205ENST00000471387 DNAJC5BQ9UF47 199 aa43.61■■■■■ 4.57
YIF1A-205ENST00000471387 UNC13AQ9UPW8 1703 aa43.57■■■■■ 4.57
YIF1A-205ENST00000471387 PABPN1Q86U42 306 aaKnown RBP eCLIP43.5■■■■■ 4.55
YIF1A-205ENST00000471387 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
YIF1A-205ENST00000471387 BICRAQ9NZM4 1560 aa43.23■■■■■ 4.51
YIF1A-205ENST00000471387 DCAF1Q9Y4B6 1507 aa43.19■■■■■ 4.5
YIF1A-205ENST00000471387 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
YIF1A-205ENST00000471387 SHROOM4Q9ULL8 1493 aa42.46■■■■■ 4.39
YIF1A-205ENST00000471387 CC2D2AQ9P2K1 1620 aa42.13■■■■■ 4.33
YIF1A-205ENST00000471387 EIF4G1Q04637 1599 aaKnown RBP42.08■■■■■ 4.33
YIF1A-205ENST00000471387 CECR2Q9BXF3 1484 aa41.92■■■■■ 4.3
YIF1A-205ENST00000471387 NCAPD3P42695 1498 aa40.81■■■■■ 4.12
YIF1A-205ENST00000471387 SMARCA4P51532 1647 aa40.78■■■■■ 4.12
YIF1A-205ENST00000471387 ATAD2BQ9ULI0 1458 aa40.75■■■■■ 4.11
YIF1A-205ENST00000471387 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
YIF1A-205ENST00000471387 BAZ1AQ9NRL2 1556 aaPredicted RBP40.57■■■■■ 4.08
YIF1A-205ENST00000471387 HMGXB3Q12766 1538 aa40.5■■■■■ 4.07
YIF1A-205ENST00000471387 MROH2BQ7Z745 1585 aa40.4■■■■■ 4.06
YIF1A-205ENST00000471387 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
YIF1A-205ENST00000471387 BAZ1BQ9UIG0 1483 aaKnown RBP40.33■■■■■ 4.05
YIF1A-205ENST00000471387 NESP48681 1621 aa40.18■■■■■ 4.02
YIF1A-205ENST00000471387 ERCC6Q03468 1493 aa40.15■■■■■ 4.02
YIF1A-205ENST00000471387 CUX2O14529 1486 aa39.96■■■■□ 3.99
YIF1A-205ENST00000471387 WIZO95785 1651 aa39.95■■■■□ 3.99
YIF1A-205ENST00000471387 LAMC3Q9Y6N6 1575 aa39.82■■■■□ 3.97
YIF1A-205ENST00000471387 DNAJC5Q9H3Z4 198 aa39.72■■■■□ 3.95
YIF1A-205ENST00000471387 KIF21AQ7Z4S6 1674 aa39.65■■■■□ 3.94
YIF1A-205ENST00000471387 THOC2Q8NI27 1593 aaKnown RBP39.65■■■■□ 3.94
YIF1A-205ENST00000471387 RSF1Q96T23 1441 aaPredicted RBP39.64■■■■□ 3.94
YIF1A-205ENST00000471387 CADPSQ9ULU8 1353 aa39.59■■■■□ 3.93
YIF1A-205ENST00000471387 PDS5BQ9NTI5 1447 aa39.56■■■■□ 3.92
YIF1A-205ENST00000471387 TOP2AP11388 1531 aaKnown RBP39.36■■■■□ 3.89
YIF1A-205ENST00000471387 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
YIF1A-205ENST00000471387 CFTRP13569 1480 aa39.19■■■■□ 3.86
YIF1A-205ENST00000471387 FANCD2Q9BXW9 1451 aa39.14■■■■□ 3.86
YIF1A-205ENST00000471387 WDR62O43379 1518 aa39.14■■■■□ 3.86
YIF1A-205ENST00000471387 CEP164Q9UPV0 1460 aa39.13■■■■□ 3.85
YIF1A-205ENST00000471387 CCDC88BA6NC98 1476 aa38.98■■■■□ 3.83
YIF1A-205ENST00000471387 URB2Q14146 1524 aaKnown RBP38.85■■■■□ 3.81
YIF1A-205ENST00000471387 PRDM2Q13029 1718 aa38.85■■■■□ 3.81
YIF1A-205ENST00000471387 TOPBP1Q92547 1522 aa38.45■■■■□ 3.75
YIF1A-205ENST00000471387 ZNF608Q9ULD9 1512 aaPredicted RBP38.34■■■■□ 3.73
YIF1A-205ENST00000471387 IFT140Q96RY7 1462 aa38.33■■■■□ 3.73
YIF1A-205ENST00000471387 DNMBPQ6XZF7 1577 aa38.31■■■■□ 3.72
YIF1A-205ENST00000471387 ABCC8Q09428 1581 aa38.29■■■■□ 3.72
YIF1A-205ENST00000471387 OSCARQ8IYS5 282 aa38.24■■■■□ 3.71
YIF1A-205ENST00000471387 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
YIF1A-205ENST00000471387 TRIM41Q8WV44 630 aa38.11■■■■□ 3.69
YIF1A-205ENST00000471387 TARBP1Q13395 1621 aaKnown RBP38.11■■■■□ 3.69
YIF1A-205ENST00000471387 EIF4G3O43432 1585 aaKnown RBP38.09■■■■□ 3.69
YIF1A-205ENST00000471387 POLA1P09884 1462 aaPredicted RBP38.07■■■■□ 3.68
YIF1A-205ENST00000471387 AQRO60306 1485 aaKnown RBP eCLIP38.03■■■■□ 3.682e-8■■■■■ 27.5
YIF1A-205ENST00000471387 RAD54L2Q9Y4B4 1467 aa37.98■■■■□ 3.67
YIF1A-205ENST00000471387 CUX1P39880 1505 aa37.92■■■■□ 3.66
YIF1A-205ENST00000471387 SOGA1O94964 1423 aa37.9■■■■□ 3.66
YIF1A-205ENST00000471387 FGD5Q6ZNL6 1462 aa37.88■■■■□ 3.65
YIF1A-205ENST00000471387 TDRD9Q8NDG6 1382 aaKnown RBP37.83■■■■□ 3.65
YIF1A-205ENST00000471387 CHD1O14646 1710 aa37.81■■■■□ 3.64
YIF1A-205ENST00000471387 RIMBP3CA6NJZ7 1639 aa37.76■■■■□ 3.64
YIF1A-205ENST00000471387 RIMBP3BA6NNM3 1639 aa37.76■■■■□ 3.64
YIF1A-205ENST00000471387 RIMBP3Q9UFD9 1639 aa37.76■■■■□ 3.64
YIF1A-205ENST00000471387 FBLN2P98095 1184 aa37.68■■■■□ 3.62
YIF1A-205ENST00000471387 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
YIF1A-205ENST00000471387 WDR97A6NE52 1622 aa37.61■■■■□ 3.61
YIF1A-205ENST00000471387 SNAPC4Q5SXM2 1469 aa37.6■■■■□ 3.61
YIF1A-205ENST00000471387 GRIN2BQ13224 1484 aa37.51■■■■□ 3.59
YIF1A-205ENST00000471387 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
YIF1A-205ENST00000471387 ABCA10Q8WWZ4 1543 aa37.44■■■■□ 3.58
YIF1A-205ENST00000471387 GAPVD1Q14C86 1478 aa37.44■■■■□ 3.58
YIF1A-205ENST00000471387 PBRM1Q86U86 1689 aa37.44■■■■□ 3.58
YIF1A-205ENST00000471387 CHMP7Q8WUX9 453 aaPredicted RBP37.42■■■■□ 3.58
YIF1A-205ENST00000471387 CYB5RLQ6IPT4 315 aa37.38■■■■□ 3.57
YIF1A-205ENST00000471387 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
YIF1A-205ENST00000471387 SYNJ1O43426 1573 aa37.36■■■■□ 3.57
YIF1A-205ENST00000471387 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
YIF1A-205ENST00000471387 SYNJ2O15056 1496 aa37.35■■■■□ 3.57
YIF1A-205ENST00000471387 TOP2BQ02880 1626 aa37.35■■■■□ 3.57
YIF1A-205ENST00000471387 CLASP1Q7Z460 1538 aa37.34■■■■□ 3.57
YIF1A-205ENST00000471387 WRNQ14191 1432 aaPredicted RBP eCLIP37.34■■■■□ 3.57
YIF1A-205ENST00000471387 ARAP1Q96P48 1450 aa37.32■■■■□ 3.56
YIF1A-205ENST00000471387 ADAMTS12P58397 1594 aa37.06■■■■□ 3.52
YIF1A-205ENST00000471387 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
YIF1A-205ENST00000471387 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
YIF1A-205ENST00000471387 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
YIF1A-205ENST00000471387 FHAD1B1AJZ9 1412 aa36.94■■■■□ 3.5
YIF1A-205ENST00000471387 NUP160Q12769 1436 aa36.91■■■■□ 3.5
YIF1A-205ENST00000471387 ERCC6L2Q5T890 1561 aa36.87■■■■□ 3.49
YIF1A-205ENST00000471387 TRHP20396 242 aaPredicted RBP36.84■■■■□ 3.49
YIF1A-205ENST00000471387 SHROOM2Q13796 1616 aa36.74■■■■□ 3.47
YIF1A-205ENST00000471387 IGF1RP08069 1367 aa36.62■■■■□ 3.45
YIF1A-205ENST00000471387 KIF27Q86VH2 1401 aa36.58■■■■□ 3.45
YIF1A-205ENST00000471387 JPH4Q96JJ6 628 aa36.57■■■■□ 3.44
YIF1A-205ENST00000471387 PRG4Q92954 1404 aaPredicted RBP36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms