RNA–Protein interactions for RNA: ENST00000238607.10

PGF-201, Transcript of placental growth factor, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PGF, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-201ENST00000238607 NISCHQ9Y2I1 1504 aa49.25■■■■■ 5.47
PGF-201ENST00000238607 CCDC180Q9P1Z9 1646 aa43.21■■■■■ 4.51
PGF-201ENST00000238607 ZCCHC6Q5VYS8 1495 aaKnown RBP41.32■■■■■ 4.21
PGF-201ENST00000238607 ABCC9O60706 1549 aa40.96■■■■■ 4.15
PGF-201ENST00000238607 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
PGF-201ENST00000238607 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
PGF-201ENST00000238607 MYO15BQ96JP2 1530 aa40.43■■■■■ 4.06
PGF-201ENST00000238607 NACADO15069 1562 aa40.26■■■■■ 4.04
PGF-201ENST00000238607 RB1CC1Q8TDY2 1594 aa39.99■■■■□ 3.99
PGF-201ENST00000238607 SHROOM4Q9ULL8 1493 aa39.83■■■■□ 3.97
PGF-201ENST00000238607 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
PGF-201ENST00000238607 UNC13AQ9UPW8 1703 aa39.19■■■■□ 3.86
PGF-201ENST00000238607 BICRAQ9NZM4 1560 aa38.72■■■■□ 3.79
PGF-201ENST00000238607 PABPN1Q86U42 306 aaKnown RBP eCLIP38.49■■■■□ 3.75
PGF-201ENST00000238607 CECR2Q9BXF3 1484 aa38.22■■■■□ 3.71
PGF-201ENST00000238607 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
PGF-201ENST00000238607 BAZ1AQ9NRL2 1556 aaPredicted RBP38.09■■■■□ 3.69
PGF-201ENST00000238607 RSF1Q96T23 1441 aaPredicted RBP38.04■■■■□ 3.68
PGF-201ENST00000238607 MROH2BQ7Z745 1585 aa38■■■■□ 3.67
PGF-201ENST00000238607 SMARCA4P51532 1647 aa37.95■■■■□ 3.67
PGF-201ENST00000238607 WIZO95785 1651 aa37.71■■■■□ 3.63
PGF-201ENST00000238607 EIF4G1Q04637 1599 aaKnown RBP37.6■■■■□ 3.61
PGF-201ENST00000238607 PEG3Q9GZU2 1588 aa37.53■■■■□ 3.6
PGF-201ENST00000238607 SMARCA2P51531 1590 aa37.4■■■■□ 3.58
PGF-201ENST00000238607 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
PGF-201ENST00000238607 TOP2AP11388 1531 aaKnown RBP37.34■■■■□ 3.57
PGF-201ENST00000238607 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
PGF-201ENST00000238607 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
PGF-201ENST00000238607 NCAPD3P42695 1498 aa37.1■■■■□ 3.53
PGF-201ENST00000238607 HMGXB3Q12766 1538 aa37.09■■■■□ 3.53
PGF-201ENST00000238607 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
PGF-201ENST00000238607 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
PGF-201ENST00000238607 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
PGF-201ENST00000238607 CFTRP13569 1480 aa36.2■■■■□ 3.38
PGF-201ENST00000238607 PRDM2Q13029 1718 aa36.15■■■■□ 3.38
PGF-201ENST00000238607 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
PGF-201ENST00000238607 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
PGF-201ENST00000238607 TRIM41Q8WV44 630 aa35.97■■■■□ 3.35
PGF-201ENST00000238607 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
PGF-201ENST00000238607 NESP48681 1621 aa35.85■■■■□ 3.33
PGF-201ENST00000238607 WRNQ14191 1432 aaPredicted RBP eCLIP35.85■■■■□ 3.33
PGF-201ENST00000238607 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
PGF-201ENST00000238607 SYNJ1O43426 1573 aa35.71■■■■□ 3.31
PGF-201ENST00000238607 PDS5BQ9NTI5 1447 aa35.65■■■■□ 3.3
PGF-201ENST00000238607 TOP2BQ02880 1626 aa35.64■■■■□ 3.3
PGF-201ENST00000238607 BIVM-ERCC5R4GMW8 1640 aa35.64■■■■□ 3.3
PGF-201ENST00000238607 CUX1P39880 1505 aa35.57■■■■□ 3.28
PGF-201ENST00000238607 CEP164Q9UPV0 1460 aa35.56■■■■□ 3.28
PGF-201ENST00000238607 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
PGF-201ENST00000238607 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
PGF-201ENST00000238607 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
PGF-201ENST00000238607 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
PGF-201ENST00000238607 SOGA1O94964 1423 aa35.24■■■■□ 3.23
PGF-201ENST00000238607 EEA1Q15075 1411 aa35.24■■■■□ 3.23
PGF-201ENST00000238607 FAM9AQ8IZU1 332 aaPredicted RBP35.24■■■■□ 3.23
PGF-201ENST00000238607 FGD5Q6ZNL6 1462 aa35.23■■■■□ 3.23
PGF-201ENST00000238607 MRC2Q9UBG0 1479 aa35.21■■■■□ 3.23
PGF-201ENST00000238607 ERCC6Q03468 1493 aa35.2■■■■□ 3.23
PGF-201ENST00000238607 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
PGF-201ENST00000238607 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
PGF-201ENST00000238607 WDR62O43379 1518 aa35.05■■■■□ 3.2
PGF-201ENST00000238607 THOC2Q8NI27 1593 aaKnown RBP35.01■■■■□ 3.2
PGF-201ENST00000238607 KIF27Q86VH2 1401 aa34.99■■■■□ 3.19
PGF-201ENST00000238607 CSRNP3Q8WYN3 585 aa34.98■■■■□ 3.19
PGF-201ENST00000238607 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
PGF-201ENST00000238607 LOC105371045A0A1W2PR82 267 aa34.95■■■■□ 3.18
PGF-201ENST00000238607 CUX2O14529 1486 aa34.95■■■■□ 3.18
PGF-201ENST00000238607 ABCA10Q8WWZ4 1543 aa34.95■■■■□ 3.18
PGF-201ENST00000238607 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
PGF-201ENST00000238607 TARBP1Q13395 1621 aaKnown RBP34.83■■■■□ 3.17
PGF-201ENST00000238607 KIF21BO75037 1637 aa34.8■■■■□ 3.16
PGF-201ENST00000238607 IFT140Q96RY7 1462 aa34.73■■■■□ 3.15
PGF-201ENST00000238607 ABCA5Q8WWZ7 1642 aa34.71■■■■□ 3.15
PGF-201ENST00000238607 EHMT2Q96KQ7 1210 aa34.7■■■■□ 3.15
PGF-201ENST00000238607 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
PGF-201ENST00000238607 PRXQ9BXM0 1461 aa34.66■■■■□ 3.14
PGF-201ENST00000238607 IGF1RP08069 1367 aa34.64■■■■□ 3.14
PGF-201ENST00000238607 TDRD9Q8NDG6 1382 aaKnown RBP34.62■■■■□ 3.13
PGF-201ENST00000238607 ERICH3Q5RHP9 1530 aa34.62■■■■□ 3.13
PGF-201ENST00000238607 GAPVD1Q14C86 1478 aa34.62■■■■□ 3.13
PGF-201ENST00000238607 RAPGEF2Q9Y4G8 1499 aa34.56■■■■□ 3.12
PGF-201ENST00000238607 CUL7Q14999 1698 aa34.55■■■■□ 3.12
PGF-201ENST00000238607 PBRM1Q86U86 1689 aa34.52■■■■□ 3.12
PGF-201ENST00000238607 TNIKQ9UKE5 1360 aa34.51■■■■□ 3.11
PGF-201ENST00000238607 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
PGF-201ENST00000238607 UBTFP17480 764 aaKnown RBP34.5■■■■□ 3.11
PGF-201ENST00000238607 ZNF608Q9ULD9 1512 aaPredicted RBP34.47■■■■□ 3.11
PGF-201ENST00000238607 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.116e-7■■■■□ 24.6
PGF-201ENST00000238607 EIF4G3O43432 1585 aaKnown RBP34.44■■■■□ 3.1
PGF-201ENST00000238607 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
PGF-201ENST00000238607 CEP162Q5TB80 1403 aa34.29■■■■□ 3.08
PGF-201ENST00000238607 ADAMTS12P58397 1594 aa34.28■■■■□ 3.08
PGF-201ENST00000238607 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
PGF-201ENST00000238607 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.06
PGF-201ENST00000238607 MAGI1Q96QZ7 1491 aaPredicted RBP34.17■■■■□ 3.06
PGF-201ENST00000238607 CTTNBP2Q8WZ74 1663 aa34.13■■■■□ 3.05
PGF-201ENST00000238607 CLIP1P30622 1438 aa34.1■■■■□ 3.05
PGF-201ENST00000238607 SYNJ2O15056 1496 aa34.02■■■■□ 3.04
PGF-201ENST00000238607 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
PGF-201ENST00000238607 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms