RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-208ENST00000479452 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
EXD3-208ENST00000479452 CCDC180Q9P1Z9 1646 aa45.89■■■■■ 4.94
EXD3-208ENST00000479452 ABCC9O60706 1549 aa45.48■■■■■ 4.87
EXD3-208ENST00000479452 DCAF8L2P0C7V8 631 aa43.65■■■■■ 4.58
EXD3-208ENST00000479452 RB1CC1Q8TDY2 1594 aa43.52■■■■■ 4.56
EXD3-208ENST00000479452 NACADO15069 1562 aa43.37■■■■■ 4.53
EXD3-208ENST00000479452 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
EXD3-208ENST00000479452 ZCCHC6Q5VYS8 1495 aaKnown RBP42.85■■■■■ 4.45
EXD3-208ENST00000479452 DCAF1Q9Y4B6 1507 aa42.62■■■■■ 4.41
EXD3-208ENST00000479452 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
EXD3-208ENST00000479452 UNC13AQ9UPW8 1703 aa42.25■■■■■ 4.35
EXD3-208ENST00000479452 DNAJC5BQ9UF47 199 aa42.12■■■■■ 4.33
EXD3-208ENST00000479452 BICRAQ9NZM4 1560 aa42.08■■■■■ 4.33
EXD3-208ENST00000479452 SCRIBQ14160 1630 aa41.96■■■■■ 4.31
EXD3-208ENST00000479452 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
EXD3-208ENST00000479452 EIF4G1Q04637 1599 aaKnown RBP41.09■■■■■ 4.17
EXD3-208ENST00000479452 CC2D2AQ9P2K1 1620 aa41.01■■■■■ 4.16
EXD3-208ENST00000479452 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
EXD3-208ENST00000479452 NCAPD3P42695 1498 aa40.07■■■■■ 4
EXD3-208ENST00000479452 SMARCA4P51532 1647 aa40.05■■■■■ 4
EXD3-208ENST00000479452 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
EXD3-208ENST00000479452 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
EXD3-208ENST00000479452 SMARCA2P51531 1590 aa39.94■■■■□ 3.98
EXD3-208ENST00000479452 MROH2BQ7Z745 1585 aa39.75■■■■□ 3.95
EXD3-208ENST00000479452 HMGXB3Q12766 1538 aa39.74■■■■□ 3.95
EXD3-208ENST00000479452 BAZ1BQ9UIG0 1483 aaKnown RBP39.71■■■■□ 3.95
EXD3-208ENST00000479452 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.93
EXD3-208ENST00000479452 ERCC6Q03468 1493 aa39.3■■■■□ 3.88
EXD3-208ENST00000479452 WIZO95785 1651 aa39.25■■■■□ 3.87
EXD3-208ENST00000479452 RSF1Q96T23 1441 aaPredicted RBP39.23■■■■□ 3.87
EXD3-208ENST00000479452 NESP48681 1621 aa39.18■■■■□ 3.86
EXD3-208ENST00000479452 DNAJC5Q9H3Z4 198 aa39.06■■■■□ 3.84
EXD3-208ENST00000479452 LAMC3Q9Y6N6 1575 aa39.01■■■■□ 3.84
EXD3-208ENST00000479452 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
EXD3-208ENST00000479452 PDS5BQ9NTI5 1447 aa38.92■■■■□ 3.82
EXD3-208ENST00000479452 CUX2O14529 1486 aa38.92■■■■□ 3.82
EXD3-208ENST00000479452 TOP2AP11388 1531 aaKnown RBP38.85■■■■□ 3.81
EXD3-208ENST00000479452 KIF21AQ7Z4S6 1674 aa38.57■■■■□ 3.76
EXD3-208ENST00000479452 CFTRP13569 1480 aa38.55■■■■□ 3.76
EXD3-208ENST00000479452 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
EXD3-208ENST00000479452 CCDC88BA6NC98 1476 aa38.47■■■■□ 3.75
EXD3-208ENST00000479452 FANCD2Q9BXW9 1451 aa38.46■■■■□ 3.75
EXD3-208ENST00000479452 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
EXD3-208ENST00000479452 CEP164Q9UPV0 1460 aa38.45■■■■□ 3.75
EXD3-208ENST00000479452 WDR62O43379 1518 aa38.24■■■■□ 3.71
EXD3-208ENST00000479452 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
EXD3-208ENST00000479452 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
EXD3-208ENST00000479452 PRDM2Q13029 1718 aa37.98■■■■□ 3.67
EXD3-208ENST00000479452 ABCC8Q09428 1581 aa37.81■■■■□ 3.64
EXD3-208ENST00000479452 TOPBP1Q92547 1522 aa37.75■■■■□ 3.63
EXD3-208ENST00000479452 IFT140Q96RY7 1462 aa37.67■■■■□ 3.62
EXD3-208ENST00000479452 DNMBPQ6XZF7 1577 aa37.64■■■■□ 3.62
EXD3-208ENST00000479452 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
EXD3-208ENST00000479452 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
EXD3-208ENST00000479452 POLA1P09884 1462 aaPredicted RBP37.41■■■■□ 3.58
EXD3-208ENST00000479452 SOGA1O94964 1423 aa37.38■■■■□ 3.57
EXD3-208ENST00000479452 AQRO60306 1485 aaKnown RBP eCLIP37.3■■■■□ 3.566e-7■■□□□ 11.9
EXD3-208ENST00000479452 RAD54L2Q9Y4B4 1467 aa37.3■■■■□ 3.56
EXD3-208ENST00000479452 CUX1P39880 1505 aa37.3■■■■□ 3.56
EXD3-208ENST00000479452 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
EXD3-208ENST00000479452 TARBP1Q13395 1621 aaKnown RBP37.27■■■■□ 3.56
EXD3-208ENST00000479452 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
EXD3-208ENST00000479452 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
EXD3-208ENST00000479452 TRIM41Q8WV44 630 aa37.19■■■■□ 3.54
EXD3-208ENST00000479452 FBLN2P98095 1184 aa37.13■■■■□ 3.53
EXD3-208ENST00000479452 WRNQ14191 1432 aaPredicted RBP eCLIP37.04■■■■□ 3.526e-6■■■■■ 36.2
EXD3-208ENST00000479452 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
EXD3-208ENST00000479452 CHMP7Q8WUX9 453 aaPredicted RBP36.94■■■■□ 3.5
EXD3-208ENST00000479452 GRIN2BQ13224 1484 aa36.93■■■■□ 3.5
EXD3-208ENST00000479452 SNAPC4Q5SXM2 1469 aa36.89■■■■□ 3.5
EXD3-208ENST00000479452 ABCA10Q8WWZ4 1543 aa36.89■■■■□ 3.5
EXD3-208ENST00000479452 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
EXD3-208ENST00000479452 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
EXD3-208ENST00000479452 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
EXD3-208ENST00000479452 SYNJ1O43426 1573 aa36.82■■■■□ 3.48
EXD3-208ENST00000479452 BIVM-ERCC5R4GMW8 1640 aa36.8■■■■□ 3.48
EXD3-208ENST00000479452 CHD1O14646 1710 aa36.76■■■■□ 3.48
EXD3-208ENST00000479452 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
EXD3-208ENST00000479452 ABCA5Q8WWZ7 1642 aa36.66■■■■□ 3.46
EXD3-208ENST00000479452 PBRM1Q86U86 1689 aa36.61■■■■□ 3.45
EXD3-208ENST00000479452 ARHGEF11O15085 1522 aa36.61■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3CA6NJZ7 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3BA6NNM3 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3Q9UFD9 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 CYB5RLQ6IPT4 315 aa36.52■■■■□ 3.44
EXD3-208ENST00000479452 FHAD1B1AJZ9 1412 aa36.46■■■■□ 3.43
EXD3-208ENST00000479452 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
EXD3-208ENST00000479452 CLASP1Q7Z460 1538 aa36.42■■■■□ 3.42
EXD3-208ENST00000479452 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
EXD3-208ENST00000479452 ADAMTS12P58397 1594 aa36.37■■■■□ 3.41
EXD3-208ENST00000479452 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
EXD3-208ENST00000479452 ARAP1Q96P48 1450 aa36.28■■■■□ 3.4
EXD3-208ENST00000479452 NUP160Q12769 1436 aa36.24■■■■□ 3.39
EXD3-208ENST00000479452 IGF1RP08069 1367 aa36.22■■■■□ 3.39
EXD3-208ENST00000479452 CEP170Q5SW79 1584 aa36.16■■■■□ 3.38
EXD3-208ENST00000479452 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
EXD3-208ENST00000479452 CARMIL1Q5VZK9 1371 aa36.03■■■■□ 3.36
EXD3-208ENST00000479452 TRHP20396 242 aaPredicted RBP36■■■■□ 3.35
EXD3-208ENST00000479452 CUL7Q14999 1698 aa35.98■■■■□ 3.35
EXD3-208ENST00000479452 PRG4Q92954 1404 aaPredicted RBP35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms