Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC105265.2-201ENST00000467189 838 ntBASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC127496.7-201ENST00000625110 1798 ntBASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC079089.2-201ENST00000531211 1277 ntBASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV23-1A0A0A0MS06 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 MIR572-201ENST00000384983 95 ntBASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.96■□□□□ 0.46
TRBV23-1A0A0A0MS06 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV23-1A0A0A0MS06 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 IRS3P-201ENST00000223076 1006 ntBASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV23-1A0A0A0MS06 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms