RNA–Protein interactions for RNA: ENST00000562341.1

AP005233.1-201, humanhuman

TSL 2 BASIC

Gene AP005233.1, Length 2,424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.1-201ENST00000562341 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
AP005233.1-201ENST00000562341 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
AP005233.1-201ENST00000562341 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
AP005233.1-201ENST00000562341 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
AP005233.1-201ENST00000562341 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
AP005233.1-201ENST00000562341 CHIC1Q5VXU3 224 aa34.77■■■■□ 3.16
AP005233.1-201ENST00000562341 MYO15BQ96JP2 1530 aa34.77■■■■□ 3.16
AP005233.1-201ENST00000562341 DCAF8L2P0C7V8 631 aa34.61■■■■□ 3.13
AP005233.1-201ENST00000562341 HRCP23327 699 aa34.49■■■■□ 3.11
AP005233.1-201ENST00000562341 DCAF1Q9Y4B6 1507 aa34.38■■■■□ 3.09
AP005233.1-201ENST00000562341 PCGF6Q9BYE7 350 aa34.16■■■■□ 3.06
AP005233.1-201ENST00000562341 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
AP005233.1-201ENST00000562341 PPARGC1BQ86YN6 1023 aaKnown RBP33.66■■■□□ 2.98
AP005233.1-201ENST00000562341 ABCC9O60706 1549 aa33.64■■■□□ 2.98
AP005233.1-201ENST00000562341 TRIM26Q12899 539 aaPredicted RBP33.43■■■□□ 2.94
AP005233.1-201ENST00000562341 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
AP005233.1-201ENST00000562341 RSF1Q96T23 1441 aaPredicted RBP33.3■■■□□ 2.92
AP005233.1-201ENST00000562341 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
AP005233.1-201ENST00000562341 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
AP005233.1-201ENST00000562341 ZEB1P37275 1124 aaPredicted RBP32.93■■■□□ 2.86
AP005233.1-201ENST00000562341 FAM9AQ8IZU1 332 aaPredicted RBP32.83■■■□□ 2.85
AP005233.1-201ENST00000562341 NACADO15069 1562 aa32.66■■■□□ 2.82
AP005233.1-201ENST00000562341 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
AP005233.1-201ENST00000562341 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
AP005233.1-201ENST00000562341 EHMT2Q96KQ7 1210 aa32.53■■■□□ 2.8
AP005233.1-201ENST00000562341 WIZO95785 1651 aa32.49■■■□□ 2.79
AP005233.1-201ENST00000562341 BAZ1AQ9NRL2 1556 aaPredicted RBP32.33■■■□□ 2.77
AP005233.1-201ENST00000562341 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
AP005233.1-201ENST00000562341 SCAF1Q9H7N4 1312 aaKnown RBP32.04■■■□□ 2.72
AP005233.1-201ENST00000562341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.98■■■□□ 2.71
AP005233.1-201ENST00000562341 PELP1Q8IZL8 1130 aaKnown RBP31.98■■■□□ 2.71
AP005233.1-201ENST00000562341 TOP2AP11388 1531 aaKnown RBP31.96■■■□□ 2.71
AP005233.1-201ENST00000562341 CCER1Q8TC90 406 aaPredicted RBP31.96■■■□□ 2.71
AP005233.1-201ENST00000562341 ABCC8Q09428 1581 aa31.9■■■□□ 2.7
AP005233.1-201ENST00000562341 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
AP005233.1-201ENST00000562341 CCDC88BA6NC98 1476 aa31.85■■■□□ 2.69
AP005233.1-201ENST00000562341 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
AP005233.1-201ENST00000562341 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
AP005233.1-201ENST00000562341 CEP162Q5TB80 1403 aa31.75■■■□□ 2.67
AP005233.1-201ENST00000562341 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
AP005233.1-201ENST00000562341 TNIKQ9UKE5 1360 aa31.67■■■□□ 2.66
AP005233.1-201ENST00000562341 SOGA1O94964 1423 aa31.66■■■□□ 2.66
AP005233.1-201ENST00000562341 TTBK1Q5TCY1 1321 aaPredicted RBP31.62■■■□□ 2.65
AP005233.1-201ENST00000562341 ACIN1Q9UKV3 1341 aaKnown RBP31.62■■■□□ 2.65
AP005233.1-201ENST00000562341 EEA1Q15075 1411 aa31.61■■■□□ 2.65
AP005233.1-201ENST00000562341 DIEXFQ68CQ4 756 aaKnown RBP31.58■■■□□ 2.65
AP005233.1-201ENST00000562341 CSRNP3Q8WYN3 585 aa31.53■■■□□ 2.64
AP005233.1-201ENST00000562341 NEUROD1Q13562 356 aa31.5■■■□□ 2.63
AP005233.1-201ENST00000562341 RUSC2Q8N2Y8 1516 aa31.48■■■□□ 2.63
AP005233.1-201ENST00000562341 UBTFP17480 764 aaKnown RBP31.47■■■□□ 2.63
AP005233.1-201ENST00000562341 GOLGA3Q08378 1498 aa31.43■■■□□ 2.62
AP005233.1-201ENST00000562341 CENPBP07199 599 aaPredicted RBP31.41■■■□□ 2.62
AP005233.1-201ENST00000562341 GTF3C3Q9Y5Q9 886 aa31.26■■■□□ 2.59
AP005233.1-201ENST00000562341 ZNF316A6NFI3 1004 aaPredicted RBP31.24■■■□□ 2.59
AP005233.1-201ENST00000562341 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
AP005233.1-201ENST00000562341 PEG3Q9GZU2 1588 aa31.19■■■□□ 2.58
AP005233.1-201ENST00000562341 KIF21BO75037 1637 aa31.19■■■□□ 2.58
AP005233.1-201ENST00000562341 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
AP005233.1-201ENST00000562341 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
AP005233.1-201ENST00000562341 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
AP005233.1-201ENST00000562341 CLIP1P30622 1438 aa31.07■■■□□ 2.56
AP005233.1-201ENST00000562341 HNRNPUL2Q1KMD3 747 aaKnown RBP31.03■■■□□ 2.56
AP005233.1-201ENST00000562341 VPS8Q8N3P4 1428 aa31■■■□□ 2.55
AP005233.1-201ENST00000562341 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
AP005233.1-201ENST00000562341 APLP2Q06481 763 aa30.9■■■□□ 2.54
AP005233.1-201ENST00000562341 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
AP005233.1-201ENST00000562341 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
AP005233.1-201ENST00000562341 YTHDC1Q96MU7 727 aaKnown RBP30.85■■■□□ 2.53
AP005233.1-201ENST00000562341 MIER1Q8N108 512 aa30.82■■■□□ 2.52
AP005233.1-201ENST00000562341 MYT1Q01538 1121 aa30.81■■■□□ 2.52
AP005233.1-201ENST00000562341 TOP2BQ02880 1626 aa30.74■■■□□ 2.51
AP005233.1-201ENST00000562341 RANGAP1P46060 587 aaPredicted RBP30.71■■■□□ 2.51
AP005233.1-201ENST00000562341 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
AP005233.1-201ENST00000562341 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
AP005233.1-201ENST00000562341 CLSPNQ9HAW4 1339 aa30.56■■■□□ 2.48
AP005233.1-201ENST00000562341 PRXQ9BXM0 1461 aa30.51■■■□□ 2.48
AP005233.1-201ENST00000562341 ARAP1Q96P48 1450 aa30.51■■■□□ 2.47
AP005233.1-201ENST00000562341 DHX57Q6P158 1386 aaKnown RBP30.49■■■□□ 2.47
AP005233.1-201ENST00000562341 KANK4Q5T7N3 995 aaPredicted RBP30.38■■■□□ 2.45
AP005233.1-201ENST00000562341 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
AP005233.1-201ENST00000562341 CUX1P39880 1505 aa30.32■■■□□ 2.44
AP005233.1-201ENST00000562341 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
AP005233.1-201ENST00000562341 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
AP005233.1-201ENST00000562341 CUX2O14529 1486 aa30.23■■■□□ 2.43
AP005233.1-201ENST00000562341 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
AP005233.1-201ENST00000562341 CCNB3Q8WWL7 1395 aa30.18■■■□□ 2.42
AP005233.1-201ENST00000562341 ARHGAP35Q9NRY4 1499 aa30.17■■■□□ 2.42
AP005233.1-201ENST00000562341 CFTRP13569 1480 aa30.08■■■□□ 2.41
AP005233.1-201ENST00000562341 ITGAEP38570 1179 aa30.04■■■□□ 2.4
AP005233.1-201ENST00000562341 SUPT16HQ9Y5B9 1047 aaKnown RBP30.01■■■□□ 2.39
AP005233.1-201ENST00000562341 PRDM2Q13029 1718 aa30.01■■■□□ 2.39
AP005233.1-201ENST00000562341 TIAM1Q13009 1591 aa29.96■■■□□ 2.39
AP005233.1-201ENST00000562341 RAB3GAP2Q9H2M9 1393 aa29.96■■■□□ 2.39
AP005233.1-201ENST00000562341 MAP3K1Q13233 1512 aa29.94■■■□□ 2.38
AP005233.1-201ENST00000562341 MAPKBP1O60336 1514 aa29.92■■■□□ 2.38
AP005233.1-201ENST00000562341 IGF1RP08069 1367 aa29.89■■■□□ 2.38
AP005233.1-201ENST00000562341 SETD5Q9C0A6 1442 aa29.84■■■□□ 2.37
AP005233.1-201ENST00000562341 LRRC9Q6ZRR7 1453 aa29.83■■■□□ 2.37
AP005233.1-201ENST00000562341 CARMIL1Q5VZK9 1371 aa29.79■■■□□ 2.36
AP005233.1-201ENST00000562341 PHLDB1Q86UU1 1377 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms