RNA–Protein interactions for RNA: ENST00000487582.1

TMEM198B-205, Transcript of transmembrane protein 198B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene TMEM198B, Length 1,581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM198B-205ENST00000487582 NISCHQ9Y2I1 1504 aa49.18■■■■■ 5.46
TMEM198B-205ENST00000487582 CCDC180Q9P1Z9 1646 aa42.9■■■■■ 4.46
TMEM198B-205ENST00000487582 ZCCHC6Q5VYS8 1495 aaKnown RBP41.35■■■■■ 4.21
TMEM198B-205ENST00000487582 DCAF1Q9Y4B6 1507 aa40.73■■■■■ 4.11
TMEM198B-205ENST00000487582 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
TMEM198B-205ENST00000487582 ABCC9O60706 1549 aa40.37■■■■■ 4.05
TMEM198B-205ENST00000487582 MYO15BQ96JP2 1530 aa40.22■■■■■ 4.03
TMEM198B-205ENST00000487582 SHROOM4Q9ULL8 1493 aa40.08■■■■■ 4.01
TMEM198B-205ENST00000487582 NACADO15069 1562 aa39.92■■■■□ 3.98
TMEM198B-205ENST00000487582 RB1CC1Q8TDY2 1594 aa39.54■■■■□ 3.92
TMEM198B-205ENST00000487582 SCRIBQ14160 1630 aa39.38■■■■□ 3.89
TMEM198B-205ENST00000487582 UNC13AQ9UPW8 1703 aa38.73■■■■□ 3.79
TMEM198B-205ENST00000487582 SUPT5HO00267 1087 aaKnown RBP38.61■■■■□ 3.77
TMEM198B-205ENST00000487582 BICRAQ9NZM4 1560 aa38.32■■■■□ 3.73
TMEM198B-205ENST00000487582 RSF1Q96T23 1441 aaPredicted RBP38.17■■■■□ 3.7
TMEM198B-205ENST00000487582 CECR2Q9BXF3 1484 aa38.16■■■■□ 3.7
TMEM198B-205ENST00000487582 PABPN1Q86U42 306 aaKnown RBP eCLIP38.06■■■■□ 3.68
TMEM198B-205ENST00000487582 BAZ1AQ9NRL2 1556 aaPredicted RBP37.98■■■■□ 3.67
TMEM198B-205ENST00000487582 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
TMEM198B-205ENST00000487582 SMARCA4P51532 1647 aa37.8■■■■□ 3.64
TMEM198B-205ENST00000487582 WIZO95785 1651 aa37.67■■■■□ 3.62
TMEM198B-205ENST00000487582 PEG3Q9GZU2 1588 aa37.36■■■■□ 3.57
TMEM198B-205ENST00000487582 TOP2AP11388 1531 aaKnown RBP37.33■■■■□ 3.57
TMEM198B-205ENST00000487582 SMARCA2P51531 1590 aa37.15■■■■□ 3.54
TMEM198B-205ENST00000487582 EIF4G1Q04637 1599 aaKnown RBP37.15■■■■□ 3.54
TMEM198B-205ENST00000487582 ATAD2BQ9ULI0 1458 aa37.14■■■■□ 3.54
TMEM198B-205ENST00000487582 CHIC1Q5VXU3 224 aa37.07■■■■□ 3.52
TMEM198B-205ENST00000487582 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
TMEM198B-205ENST00000487582 CCDC88BA6NC98 1476 aa36.91■■■■□ 3.5
TMEM198B-205ENST00000487582 NCAPD3P42695 1498 aa36.82■■■■□ 3.49
TMEM198B-205ENST00000487582 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
TMEM198B-205ENST00000487582 CC2D2AQ9P2K1 1620 aa36.57■■■■□ 3.45
TMEM198B-205ENST00000487582 TRIM41Q8WV44 630 aa36.35■■■■□ 3.41
TMEM198B-205ENST00000487582 ABCC8Q09428 1581 aa36.13■■■■□ 3.38
TMEM198B-205ENST00000487582 CFTRP13569 1480 aa36.02■■■■□ 3.36
TMEM198B-205ENST00000487582 WRNQ14191 1432 aaPredicted RBP eCLIP35.93■■■■□ 3.34
TMEM198B-205ENST00000487582 PRDM2Q13029 1718 aa35.9■■■■□ 3.34
TMEM198B-205ENST00000487582 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
TMEM198B-205ENST00000487582 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
TMEM198B-205ENST00000487582 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
TMEM198B-205ENST00000487582 BIVM-ERCC5R4GMW8 1640 aa35.64■■■■□ 3.3
TMEM198B-205ENST00000487582 FAM9AQ8IZU1 332 aaPredicted RBP35.62■■■■□ 3.29
TMEM198B-205ENST00000487582 LOC105371045A0A1W2PR82 267 aa35.6■■■■□ 3.29
TMEM198B-205ENST00000487582 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
TMEM198B-205ENST00000487582 EEA1Q15075 1411 aa35.53■■■■□ 3.28
TMEM198B-205ENST00000487582 CUX1P39880 1505 aa35.52■■■■□ 3.28
TMEM198B-205ENST00000487582 DNAJC5BQ9UF47 199 aa35.51■■■■□ 3.28
TMEM198B-205ENST00000487582 SOGA1O94964 1423 aa35.48■■■■□ 3.27
TMEM198B-205ENST00000487582 NESP48681 1621 aa35.47■■■■□ 3.27
TMEM198B-205ENST00000487582 FANCD2Q9BXW9 1451 aa35.46■■■■□ 3.27
TMEM198B-205ENST00000487582 RUSC2Q8N2Y8 1516 aa35.33■■■■□ 3.25
TMEM198B-205ENST00000487582 PDS5BQ9NTI5 1447 aa35.27■■■■□ 3.24
TMEM198B-205ENST00000487582 CSRNP3Q8WYN3 585 aa35.25■■■■□ 3.23
TMEM198B-205ENST00000487582 CEP164Q9UPV0 1460 aa35.24■■■■□ 3.23
TMEM198B-205ENST00000487582 DNMBPQ6XZF7 1577 aa35.2■■■■□ 3.23
TMEM198B-205ENST00000487582 FGD5Q6ZNL6 1462 aa35.11■■■■□ 3.21
TMEM198B-205ENST00000487582 TOPBP1Q92547 1522 aa35.1■■■■□ 3.21
TMEM198B-205ENST00000487582 KIF21AQ7Z4S6 1674 aa35.09■■■■□ 3.21
TMEM198B-205ENST00000487582 EHMT2Q96KQ7 1210 aa35.06■■■■□ 3.2
TMEM198B-205ENST00000487582 KIF21BO75037 1637 aa35.05■■■■□ 3.2
TMEM198B-205ENST00000487582 KIF27Q86VH2 1401 aa35.03■■■■□ 3.2
TMEM198B-205ENST00000487582 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
TMEM198B-205ENST00000487582 GOLGA3Q08378 1498 aa35.01■■■■□ 3.19
TMEM198B-205ENST00000487582 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
TMEM198B-205ENST00000487582 TNIKQ9UKE5 1360 aa34.92■■■■□ 3.18
TMEM198B-205ENST00000487582 CUX2O14529 1486 aa34.89■■■■□ 3.18
TMEM198B-205ENST00000487582 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
TMEM198B-205ENST00000487582 PRXQ9BXM0 1461 aa34.82■■■■□ 3.16
TMEM198B-205ENST00000487582 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
TMEM198B-205ENST00000487582 ERICH3Q5RHP9 1530 aa34.8■■■■□ 3.16
TMEM198B-205ENST00000487582 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
TMEM198B-205ENST00000487582 UBTFP17480 764 aaKnown RBP34.78■■■■□ 3.16
TMEM198B-205ENST00000487582 RAPGEF2Q9Y4G8 1499 aa34.77■■■■□ 3.16
TMEM198B-205ENST00000487582 WDR97A6NE52 1622 aa34.72■■■■□ 3.15
TMEM198B-205ENST00000487582 CEP162Q5TB80 1403 aa34.7■■■■□ 3.15
TMEM198B-205ENST00000487582 IGF1RP08069 1367 aa34.69■■■■□ 3.14
TMEM198B-205ENST00000487582 WDR62O43379 1518 aa34.64■■■■□ 3.14
TMEM198B-205ENST00000487582 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
TMEM198B-205ENST00000487582 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
TMEM198B-205ENST00000487582 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
TMEM198B-205ENST00000487582 CARMIL1Q5VZK9 1371 aa34.53■■■■□ 3.12
TMEM198B-205ENST00000487582 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
TMEM198B-205ENST00000487582 CUL7Q14999 1698 aa34.47■■■■□ 3.11
TMEM198B-205ENST00000487582 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
TMEM198B-205ENST00000487582 CLIP1P30622 1438 aa34.43■■■■□ 3.1
TMEM198B-205ENST00000487582 TDRD9Q8NDG6 1382 aaKnown RBP34.42■■■■□ 3.1
TMEM198B-205ENST00000487582 IFT140Q96RY7 1462 aa34.41■■■■□ 3.1
TMEM198B-205ENST00000487582 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
TMEM198B-205ENST00000487582 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.06
TMEM198B-205ENST00000487582 GRIN2BQ13224 1484 aa34.18■■■■□ 3.06
TMEM198B-205ENST00000487582 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
TMEM198B-205ENST00000487582 VPS8Q8N3P4 1428 aa34.15■■■■□ 3.06
TMEM198B-205ENST00000487582 TRIM26Q12899 539 aaPredicted RBP34.12■■■■□ 3.05
TMEM198B-205ENST00000487582 RANGAP1P46060 587 aaPredicted RBP34.11■■■■□ 3.05
TMEM198B-205ENST00000487582 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
TMEM198B-205ENST00000487582 CTTNBP2Q8WZ74 1663 aa34.09■■■■□ 3.05
TMEM198B-205ENST00000487582 ARAP1Q96P48 1450 aa34.09■■■■□ 3.05
TMEM198B-205ENST00000487582 EIF4G3O43432 1585 aaKnown RBP34.08■■■■□ 3.05
TMEM198B-205ENST00000487582 ADAMTS12P58397 1594 aa34.08■■■■□ 3.05
TMEM198B-205ENST00000487582 PCGF6Q9BYE7 350 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms